Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTHRC1Q96CG8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 RNU1-64P-201ENST00000365443 163 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 RNU6-190P-201ENST00000384154 102 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 RNU6-550P-201ENST00000391057 101 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 RNU6-817P-201ENST00000391083 104 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AL592114.1-201ENST00000403842 483 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AL590639.1-201ENST00000456484 337 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AP000926.1-201ENST00000479573 241 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC092451.1-201ENST00000480211 153 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC098591.2-201ENST00000510152 315 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 FTH1P9-201ENST00000513251 355 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 RNU7-30P-201ENST00000516835 62 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 NARSP2-201ENST00000518524 679 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC107953.1-201ENST00000522216 297 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC107016.1-201ENST00000550463 337 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AL121576.1-201ENST00000556055 276 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC090877.1-201ENST00000561418 344 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC067852.3-201ENST00000589177 561 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AP001330.4-201ENST00000604350 154 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC007619.2-201ENST00000605743 379 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 uc_338.5-201ENST00000611839 155 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC009233.1-201ENST00000616477 371 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 AC018555.1-201ENST00000567548 1980 ntBASIC3.62□□□□□ -1.83
CTHRC1Q96CG8 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 LINC02471-203ENST00000641941 4752 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AC007685.1-201ENST00000329806 452 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 RNU6-82P-201ENST00000363970 107 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 RPL32P23-201ENST00000397237 405 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AL138878.1-201ENST00000405131 347 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AL445189.1-201ENST00000405722 338 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 MTND3P8-201ENST00000412909 339 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 TOMM22P1-201ENST00000418578 312 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 NCOR1P3-201ENST00000420479 303 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AL356535.1-201ENST00000440335 398 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 RPL37P6-201ENST00000460682 294 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 PPIAP15-201ENST00000479662 484 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AL359273.1-201ENST00000510918 627 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AC023141.12-201ENST00000512399 199 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AC120057.2-201ENST00000571520 271 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 RPS3AP23-202ENST00000574601 686 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 DPPA3P3-201ENST00000603842 430 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AP002826.1-201ENST00000608835 315 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AL355810.1-201ENST00000614629 552 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 AC112200.1-201ENST00000625015 234 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 MTND5P42-201ENST00000637720 498 ntBASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.61□□□□□ -1.83
CTHRC1Q96CG8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CTHRC1Q96CG8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.6□□□□□ -1.83
CTHRC1Q96CG8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms