Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.09□□□□□ -2.07
TOPBP1Q92547 RPL21P32-201ENST00000419877 477 ntBASIC2.09□□□□□ -2.07
TOPBP1Q92547 AL606495.1-201ENST00000422100 813 ntBASIC2.09□□□□□ -2.07
TOPBP1Q92547 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.09□□□□□ -2.07
TOPBP1Q92547 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.09□□□□□ -2.07
TOPBP1Q92547 AC090096.1-201ENST00000489168 390 ntBASIC2.09□□□□□ -2.07
TOPBP1Q92547 OSBPL9P3-201ENST00000534523 595 ntBASIC2.09□□□□□ -2.07
TOPBP1Q92547 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.09□□□□□ -2.07
TOPBP1Q92547 AL669831.4-202ENST00000590817 238 ntBASIC2.09□□□□□ -2.07
TOPBP1Q92547 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
TOPBP1Q92547 RBBP8P1-201ENST00000449447 1844 ntBASIC2.09□□□□□ -2.08
TOPBP1Q92547 Y_RNA.393-201ENST00000383936 102 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.08□□□□□ -2.08
TOPBP1Q92547 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.08□□□□□ -2.08
TOPBP1Q92547 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.08□□□□□ -2.08
TOPBP1Q92547 MTCYBP34-201ENST00000439552 670 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 UBBP3-201ENST00000445497 241 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 AL031183.1-201ENST00000457667 207 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 RNU6-488P-201ENST00000515918 99 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 RNA5SP436-201ENST00000516020 115 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.08□□□□□ -2.08
TOPBP1Q92547 AC079610.2-201ENST00000604818 690 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 AC018926.3-201ENST00000618841 406 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 AC068620.4-201ENST00000636730 1182 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TOPBP1Q92547 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
TOPBP1Q92547 PABPC1P9-201ENST00000426076 1612 ntBASIC2.08□□□□□ -2.08
TOPBP1Q92547 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
TOPBP1Q92547 SSXP10-201ENST00000402595 565 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TOPBP1Q92547 UBE2V1P9-201ENST00000414760 368 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.07□□□□□ -2.08
TOPBP1Q92547 AC108157.1-201ENST00000510511 539 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.07□□□□□ -2.08
TOPBP1Q92547 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.07□□□□□ -2.08
TOPBP1Q92547 AC004775.1-201ENST00000607389 753 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 AC008083.4-201ENST00000615076 444 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 MIR6076-201ENST00000617521 113 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 AC017104.5-201ENST00000637647 639 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 SGO1P2-201ENST00000429458 1589 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TOPBP1Q92547 RNA5SP38-201ENST00000410750 119 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.07□□□□□ -2.08
TOPBP1Q92547 AL034418.1-201ENST00000448675 860 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 RNA5SP310-201ENST00000459084 116 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TOPBP1Q92547 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.07□□□□□ -2.08
TOPBP1Q92547 RNU6-760P-201ENST00000516078 97 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 DUXAP5-201ENST00000529668 529 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 AP001330.4-201ENST00000604350 154 ntBASIC2.07□□□□□ -2.08
TOPBP1Q92547 ICE2P2-201ENST00000483823 2787 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TOPBP1Q92547 SNORA27.3-201ENST00000364937 134 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 RNU1-52P-201ENST00000384190 164 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.06□□□□□ -2.08
TOPBP1Q92547 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.06□□□□□ -2.08
TOPBP1Q92547 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.06□□□□□ -2.08
TOPBP1Q92547 AC083923.1-201ENST00000523708 376 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 SNRPGP16-201ENST00000533275 226 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 NBEAP1-201ENST00000554452 979 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 MIR5694-201ENST00000581190 76 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 MIR5194-201ENST00000582634 120 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 GLUD1P4-201ENST00000590914 418 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.06□□□□□ -2.08
TOPBP1Q92547 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.06□□□□□ -2.08
TOPBP1Q92547 AL138880.2-201ENST00000616214 239 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.06□□□□□ -2.08
TOPBP1Q92547 AL161722.3-201ENST00000605789 2983 ntBASIC2.05□□□□□ -2.08
TOPBP1Q92547 RNU6-543P-201ENST00000362576 108 ntBASIC2.05□□□□□ -2.08
TOPBP1Q92547 AL645638.1-201ENST00000440519 361 ntBASIC2.05□□□□□ -2.08
TOPBP1Q92547 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.05□□□□□ -2.08
TOPBP1Q92547 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.05□□□□□ -2.08
TOPBP1Q92547 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.05□□□□□ -2.08
TOPBP1Q92547 AC087373.1-201ENST00000524920 491 ntBASIC2.05□□□□□ -2.08
TOPBP1Q92547 AC125611.2-201ENST00000551907 647 ntBASIC2.05□□□□□ -2.08
TOPBP1Q92547 AC012254.4-201ENST00000588843 273 ntBASIC2.05□□□□□ -2.08
TOPBP1Q92547 AC112503.2-201ENST00000609005 552 ntBASIC2.05□□□□□ -2.08
TOPBP1Q92547 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TOPBP1Q92547 MIR373-201ENST00000362273 69 ntBASIC2.04□□□□□ -2.08
TOPBP1Q92547 RNU1-139P-201ENST00000391307 165 ntBASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC007098.1-201ENST00000420122 367 ntBASIC2.04□□□□□ -2.08
TOPBP1Q92547 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC096632.1-201ENST00000427395 310 ntBASIC2.04□□□□□ -2.08
TOPBP1Q92547 UBE2V1P6-201ENST00000430840 422 ntBASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.04□□□□□ -2.08
TOPBP1Q92547 RPL35AP22-201ENST00000436855 335 ntBASIC2.04□□□□□ -2.08
TOPBP1Q92547 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.04□□□□□ -2.08
TOPBP1Q92547 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.04□□□□□ -2.08
TOPBP1Q92547 OR10V3P-201ENST00000525712 725 ntBASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC090666.1-201ENST00000578241 445 ntBASIC2.04□□□□□ -2.08
TOPBP1Q92547 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.04□□□□□ -2.08
TOPBP1Q92547 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC013468.1-201ENST00000608680 598 ntBASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms