Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC103706.2-201ENST00000638080 240 ntBASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RTN4IP1Q8WWV3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 MTND4P16-201ENST00000466108 1367 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 RPL21P132-201ENST00000331267 462 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-931P-201ENST00000363850 107 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-1078P-201ENST00000364522 103 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 RNU1-51P-201ENST00000365345 176 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-723P-201ENST00000383973 107 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-1200P-201ENST00000384162 107 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-198P-201ENST00000384258 104 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 MIR514A1-201ENST00000385133 98 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AC119751.3-201ENST00000399720 670 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 MIR320C1-201ENST00000408566 88 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AF274854.1-201ENST00000413236 615 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 MTND1P20-201ENST00000430341 950 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 SNRPEP7-201ENST00000438350 220 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 Z73417.1-201ENST00000447373 778 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 TPT1P14-201ENST00000448018 505 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 LARP1BP2-201ENST00000486594 519 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 CDC42P4-201ENST00000510507 563 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AC008716.1-201ENST00000511084 513 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 RN7SKP24-201ENST00000515888 284 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-1256P-201ENST00000516539 103 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AC009097.3-201ENST00000563557 1018 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AC011471.1-201ENST00000585766 187 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AL136363.1-201ENST00000605349 337 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 MIR6130-201ENST00000619419 109 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 AP003485.2-201ENST00000623636 610 ntBASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RTN4IP1Q8WWV3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
RTN4IP1Q8WWV3 MIR21-201ENST00000362134 72 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 RNU6-462P-201ENST00000362659 105 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 RNU6-525P-201ENST00000363685 104 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 RNU6-270P-201ENST00000364131 105 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 SNORD114-30-201ENST00000364448 72 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 MIR144-201ENST00000384886 86 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 RNU6-1197P-201ENST00000391183 107 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 RNA5SP354-201ENST00000391247 136 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 RPL22P18-201ENST00000417197 377 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC083875.1-201ENST00000419509 405 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC018630.2-202ENST00000422992 927 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC104389.3-201ENST00000445629 235 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC108938.1-201ENST00000451204 136 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 RPL23AP35-201ENST00000451906 501 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC092798.1-201ENST00000458542 409 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 snoU13.28-201ENST00000459235 104 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 SNORD11.1-201ENST00000459482 85 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC104563.1-201ENST00000476147 376 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 RPS15AP34-201ENST00000487776 387 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC104685.1-201ENST00000502445 371 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC034244.1-201ENST00000507687 207 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AL359273.1-201ENST00000510918 627 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 OR5BM1P-201ENST00000512021 366 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 RNA5SP320-201ENST00000516263 124 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 RNU6-928P-201ENST00000516876 104 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC013828.2-201ENST00000532487 235 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 MTND1P24-201ENST00000552175 861 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC106782.4-201ENST00000568264 210 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC136618.2-201ENST00000575091 400 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 AC060771.1-201ENST00000582031 164 ntBASIC2.02□□□□□ -2.09
RTN4IP1Q8WWV3 MIR544B-201ENST00000582372 78 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms