Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-1329P-201ENST00000365664 107 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 MIR625-201ENST00000385047 85 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 Z98745.1-201ENST00000402553 494 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 MIR1298-201ENST00000408783 112 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 SNORA11-201ENST00000408789 128 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 RPS12P5-201ENST00000423449 371 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 RPEP5-201ENST00000441137 268 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 SCARNA10-201ENST00000459255 330 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 RNU7-120P-201ENST00000459334 63 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 PPIAP21-201ENST00000464473 501 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 RPL21P126-201ENST00000470049 478 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 RPL21P103-201ENST00000479921 488 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 AC069499.1-201ENST00000489433 509 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-347P-201ENST00000516658 105 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 RN7SKP82-201ENST00000516786 223 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 AC144568.1-201ENST00000520139 137 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 DEFB108D-201ENST00000527787 222 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 BX284668.6-201ENST00000606899 438 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 AP005019.3-201ENST00000620418 560 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 AC083843.2-201ENST00000568248 6253 ntBASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SHKBP1Q8TBC3 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AL137003.2-201ENST00000606924 2538 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 Y_RNA.54-201ENST00000362766 105 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-1243P-201ENST00000364028 107 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 MIR215-201ENST00000384858 110 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AL139039.1-201ENST00000401900 692 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC096920.1-201ENST00000423991 241 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AL591704.1-201ENST00000432574 275 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC127537.2-201ENST00000439258 465 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 FHP1-201ENST00000442741 703 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 TDGF1P1-201ENST00000445734 527 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC009963.2-201ENST00000453431 138 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AL136097.1-201ENST00000456945 913 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 RPL23AP24-201ENST00000458203 385 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 RNU7-138P-201ENST00000459479 64 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC010618.1-201ENST00000469924 477 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC109327.1-201ENST00000471666 403 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC018437.1-201ENST00000492214 406 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 MIR4675-201ENST00000577898 77 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC233702.9-201ENST00000581528 203 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC002044.1-201ENST00000606707 158 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC025031.4-201ENST00000621248 3271 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 AC097461.1-201ENST00000568928 2821 ntBASIC4.82□□□□□ -1.64
SHKBP1Q8TBC3 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 AL136164.3-201ENST00000624429 3978 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 AC125257.1-201ENST00000560400 2930 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 Y_RNA.277-201ENST00000364754 102 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 RNU6-754P-201ENST00000391166 107 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 U3.35-201ENST00000408405 208 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 RPL21P24-201ENST00000413752 448 ntBASIC4.81□□□□□ -1.64
SHKBP1Q8TBC3 AL356387.2-201ENST00000422272 243 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms