Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 AC007529.1-201ENST00000418574 2178 ntBASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NKX2-3Q8TAU0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 RN7SKP227-201ENST00000364445 330 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 Y_RNA.262-201ENST00000364641 102 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 RNA5SP428-201ENST00000365129 132 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 RNU6-1056P-201ENST00000383996 107 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 RNU6-80P-201ENST00000384195 107 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 SNORA12.2-201ENST00000391040 156 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 GLULP6-201ENST00000399502 913 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 SNORA77-201ENST00000408716 125 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 AL358453.1-201ENST00000422522 250 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 RPL18P10-201ENST00000425606 538 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 CEACAMP1-201ENST00000434624 1035 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 KNOP1P3-201ENST00000446933 426 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 EEF1A1P1-201ENST00000447052 739 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 AC234775.1-201ENST00000454247 670 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 RPL30P11-201ENST00000495304 339 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 MTND3P25-201ENST00000509243 135 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 SNORA27.4-201ENST00000516650 95 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 AP002001.1-203ENST00000534002 267 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 AC040958.1-201ENST00000561102 201 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 MIR5692C2-201ENST00000577959 77 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 MIR1254-2-201ENST00000579553 63 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 MIR6864-201ENST00000617935 70 ntBASIC6□□□□□ -1.45
NKX2-3Q8TAU0 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NKX2-3Q8TAU0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 RNU4-84P-201ENST00000364200 139 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 RN7SKP153-201ENST00000365026 316 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 SNORA2.3-201ENST00000383920 135 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 RNU6-514P-201ENST00000384208 107 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 RNU6-1289P-201ENST00000384431 106 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 MIR521-1-201ENST00000384902 87 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 OOSP1P1-201ENST00000423265 274 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 AC009238.2-201ENST00000431026 355 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 AC127537.2-201ENST00000439258 465 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 RPS17P2-201ENST00000461663 408 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 Y_RNA.686-201ENST00000516548 134 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 RNU6-971P-201ENST00000516920 106 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 MIR548X2-201ENST00000579776 100 ntBASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
NKX2-3Q8TAU0 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 DDX10P1-201ENST00000448545 1933 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 Y_RNA.23-201ENST00000362496 106 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 SNORA63.4-201ENST00000362763 126 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 MIR539-201ENST00000365690 78 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 RNU6-1293P-201ENST00000384077 107 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 MIR186-201ENST00000384988 86 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 CYCSP33-201ENST00000414485 327 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 AC004938.1-201ENST00000438468 308 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 U8.21-201ENST00000459536 136 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 AL160314.1-201ENST00000490836 438 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 AC140172.1-201ENST00000502928 141 ntBASIC5.98□□□□□ -1.45
NKX2-3Q8TAU0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms