Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC106730.3-201ENST00000624568 641 ntBASIC1.42□□□□□ -2.18
NUP35Q8NFH5 AP003400.5-201ENST00000624827 617 ntBASIC1.42□□□□□ -2.18
NUP35Q8NFH5 MTND5P30-201ENST00000452896 1731 ntBASIC1.42□□□□□ -2.18
NUP35Q8NFH5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 RNU6-582P-201ENST00000362989 107 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 SNORA16.1-201ENST00000364597 132 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 OR1L1-202ENST00000373686 1083 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AL136133.1-201ENST00000413694 376 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 MTND2P6-201ENST00000455337 1030 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AC087276.1-201ENST00000529659 480 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 LINC00933-203ENST00000559812 219 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AC007151.1-201ENST00000572774 483 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 SNRPGP19-201ENST00000603826 189 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AC068313.1-201ENST00000604028 1008 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AL355802.4-201ENST00000607635 548 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 FTX_3.1-201ENST00000610451 147 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.41□□□□□ -2.18
NUP35Q8NFH5 MTND5P6-201ENST00000422338 1798 ntBASIC1.41□□□□□ -2.18
NUP35Q8NFH5 AC006020.1-201ENST00000420179 1854 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 RNU1-73P-201ENST00000383971 164 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 Y_RNA.510-201ENST00000384511 114 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 SNORD116-23-201ENST00000384645 92 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 RNU6-796P-201ENST00000391086 107 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 RPL23AP29-201ENST00000397284 453 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AL356131.1-201ENST00000405826 414 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 RNU2-20P-201ENST00000410425 191 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AL161449.1-201ENST00000414531 1199 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 HSPE1P21-201ENST00000438283 308 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AC005297.2-201ENST00000450430 606 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 snoU109.1-201ENST00000459339 135 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 RNU6-885P-201ENST00000516607 104 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 LARP7P2-201ENST00000575306 125 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AC106052.1-201ENST00000608029 497 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AC007349.4-201ENST00000608114 532 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 RMST_10.1-201ENST00000616309 154 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 AL162233.1-201ENST00000620014 944 ntBASIC1.4□□□□□ -2.19
NUP35Q8NFH5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
NUP35Q8NFH5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NUP35Q8NFH5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.39□□□□□ -2.19
NUP35Q8NFH5 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NUP35Q8NFH5 SNORD48-201ENST00000364953 64 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 RNU6-657P-201ENST00000383904 107 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AL109755.1-201ENST00000401791 649 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 U6atac.2-201ENST00000408644 118 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 RNU2-63P-201ENST00000410792 194 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 RNU4-53P-201ENST00000410828 140 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 VN1R51P-201ENST00000411675 945 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 RPS20P15-201ENST00000412792 311 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AL445685.2-201ENST00000422551 342 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.39□□□□□ -2.19
NUP35Q8NFH5 FABP5P14-201ENST00000437273 393 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AC093155.1-201ENST00000440164 826 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NUP35Q8NFH5 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.39□□□□□ -2.19
NUP35Q8NFH5 ATG12P2-201ENST00000456830 416 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AC034222.1-201ENST00000494052 532 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AC093281.2-201ENST00000510153 597 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AC091965.2-201ENST00000512324 613 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 HSPA8P13-201ENST00000523715 472 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AL132857.1-201ENST00000555180 708 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AC009063.1-201ENST00000563342 702 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 MIR4419B-201ENST00000577260 68 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 NRBF2P1-201ENST00000587407 859 ntBASIC1.39□□□□□ -2.19
NUP35Q8NFH5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms