Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RMST_3.1-201ENST00000611651 109 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 uc_338.11-201ENST00000619132 160 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC093648.1-201ENST00000623546 606 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC099654.5-201ENST00000636479 350 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AL133412.1-201ENST00000380194 2992 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AC004925.1-201ENST00000624256 2706 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 NOL8P1-201ENST00000508336 3529 ntBASIC4.54□□□□□ -1.68
SMC1BQ8NDV3 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 CEP170P1-201ENST00000502249 4587 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC067945.1-201ENST00000342609 618 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 Y_RNA.157-201ENST00000363638 102 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 SNORA80A-201ENST00000363922 136 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 RNU6-335P-201ENST00000364563 113 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 RNA5SP235-201ENST00000365411 114 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC110754.1-201ENST00000399740 601 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AL359634.1-202ENST00000404721 284 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 RN7SKP167-201ENST00000411047 285 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 PPP1R11P2-201ENST00000423543 382 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 MTND1P18-201ENST00000448191 573 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 RPS29P15-201ENST00000458329 171 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC010631.1-201ENST00000474150 156 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC114781.4-201ENST00000513707 639 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 RNA5SP503-201ENST00000517047 117 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 RNU6-840P-201ENST00000517275 65 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 OR5AL2P-201ENST00000532185 920 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC012182.1-201ENST00000570133 895 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AL035413.2-201ENST00000604801 525 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 MIR7112-201ENST00000616126 65 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC006504.8-201ENST00000621046 635 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC079684.1-201ENST00000621405 437 ntBASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.53□□□□□ -1.68
SMC1BQ8NDV3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 RIOK3P1-201ENST00000418778 1528 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 Y_RNA.86-201ENST00000363020 111 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AL136116.1-201ENST00000403591 381 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 SNRPEP8-201ENST00000442866 260 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AC073415.1-201ENST00000449240 153 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 S100A11P2-201ENST00000467589 312 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 VN1R104P-201ENST00000505115 1009 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AC114786.4-201ENST00000508771 728 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AC135001.1-201ENST00000544546 283 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 CYP4A43P-201ENST00000568156 121 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 MIR3945-201ENST00000581853 98 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AC091135.1-201ENST00000585943 307 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 UBE2V2P2-201ENST00000587677 504 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AP001029.3-201ENST00000588063 596 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AC008945.2-201ENST00000606056 604 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 AC013412.1-201ENST00000610687 192 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 Y_RNA.804-201ENST00000615262 101 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SMC1BQ8NDV3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AL137003.2-201ENST00000606924 2538 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 TAB3P1-202ENST00000452645 1634 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 XIAPP3-201ENST00000312918 795 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 RPL7P26-201ENST00000333817 754 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 Y_RNA.72-201ENST00000362894 103 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms