Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TMEM167AP1-201ENST00000423409 219 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AL158071.1-201ENST00000430315 461 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 NIPA2P5-201ENST00000452282 464 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 ANP32BP2-201ENST00000454525 545 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 ELOCP24-201ENST00000456370 334 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AC027575.1-201ENST00000481064 460 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 MTCYBP40-201ENST00000509390 1135 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AC093840.1-201ENST00000511599 336 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 RN7SKP122-201ENST00000515923 296 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 RNU1-86P-201ENST00000516108 154 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 RNU1-6P-201ENST00000516290 144 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 RNU1-107P-201ENST00000516617 154 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 Y_RNA.708-201ENST00000516950 96 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AL355598.1-201ENST00000604169 202 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AC004805.2-201ENST00000605382 482 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AC048347.1-201ENST00000624621 427 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RETREG2Q8NC44 MAPK10-320ENST00000641462 6696 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 AC083843.3-201ENST00000623679 2186 ntBASIC5.35□□□□□ -1.55
RETREG2Q8NC44 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AC138393.1-203ENST00000327086 343 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 RNU1-108P-201ENST00000362556 161 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 Y_RNA.138-201ENST00000363462 102 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 SNORD14B-201ENST00000364533 90 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 SNORA40C-201ENST00000391285 128 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 EIF4EP1-201ENST00000422311 642 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 RPS17P8-201ENST00000434525 335 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AL162591.2-201ENST00000449634 317 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AC096576.1-201ENST00000489014 359 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 RN7SL558P-201ENST00000497468 299 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 SCARNA22-201ENST00000503991 125 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AC005741.1-201ENST00000511094 432 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AC021146.3-201ENST00000511911 260 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 RNA5SP497-201ENST00000516081 97 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 RNU6-1045P-201ENST00000516321 107 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AC025755.1-201ENST00000521306 278 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AC074050.1-201ENST00000563247 211 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AL080274.1-201ENST00000605565 220 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 AL022401.1-201ENST00000619498 108 ntBASIC5.34□□□□□ -1.55
RETREG2Q8NC44 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.34□□□□□ -1.55
RETREG2Q8NC44 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
RETREG2Q8NC44 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.34□□□□□ -1.56
RETREG2Q8NC44 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 KPNA2P1-201ENST00000458289 1591 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AC126323.6-202ENST00000568092 3511 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 RNA5SP447-201ENST00000363749 119 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 MIR129-1-201ENST00000384972 72 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AL590632.1-201ENST00000424289 371 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 RPL21P91-201ENST00000429231 479 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 RPS6P12-201ENST00000432491 726 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AL078601.1-201ENST00000444542 271 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 Y_RNA.631-201ENST00000459607 101 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 RPS23P3-201ENST00000470993 430 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AC093303.1-201ENST00000514549 295 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 RNU6-307P-201ENST00000516743 106 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 SNORA31.19-201ENST00000517079 126 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AC009902.1-201ENST00000519351 183 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AL669831.3-213ENST00000636676 183 ntBASIC5.33□□□□□ -1.56
RETREG2Q8NC44 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
RETREG2Q8NC44 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC5.32□□□□□ -1.56
RETREG2Q8NC44 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms