Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 Y_RNA.29-201ENST00000362570 113 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 SNORD56.6-201ENST00000384569 71 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 RNA5SP36-201ENST00000410197 133 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 PIGPP3-201ENST00000425307 415 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 RPL7AP49-201ENST00000429522 581 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AL591043.1-201ENST00000432461 424 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AL591438.1-201ENST00000433508 581 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AC034236.1-201ENST00000469891 373 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AC091912.1-201ENST00000511351 248 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AC007225.2-201ENST00000562529 256 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AC090617.3-201ENST00000573670 475 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AC053481.4-201ENST00000583164 216 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AC010201.1-201ENST00000605051 540 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 FTX_2.1-201ENST00000618816 94 ntBASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.12□□□□□ -1.59
DEPDC4Q8N2C3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 RNA5SP242-201ENST00000364171 118 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 SNORA7.2-201ENST00000364446 145 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 U3.15-201ENST00000365398 212 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 MIR215-201ENST00000384858 110 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 AP000907.1-201ENST00000428428 510 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 HMGN2P21-201ENST00000447764 270 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 RPS18P6-201ENST00000476880 458 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 RN7SL570P-201ENST00000484405 292 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 IGBP1P1-201ENST00000554337 1009 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 AC136932.1-201ENST00000574771 208 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 MIR3176-201ENST00000582210 90 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 AL049767.1-202ENST00000637826 242 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 AL731532.2-201ENST00000623542 1953 ntBASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
DEPDC4Q8N2C3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 Y_RNA.180-201ENST00000363867 113 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 RNU6-105P-201ENST00000363909 104 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 Y_RNA.581-201ENST00000391017 97 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 RNU2-14P-201ENST00000411053 191 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 AC092047.1-201ENST00000424997 240 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 RPL21P40-201ENST00000428586 483 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 RPS27P18-201ENST00000431701 247 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 AZGP1P2-201ENST00000454506 345 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 RNU7-87P-201ENST00000459343 62 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 RNU6-703P-201ENST00000516946 107 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 AC096996.1-201ENST00000563813 325 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 MIR4472-2-201ENST00000582069 67 ntBASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
DEPDC4Q8N2C3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms