Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC073346.2-201ENST00000624724 2058 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 OTUD4P1-201ENST00000237841 3067 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 SNORD17-201ENST00000390930 237 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 RN7SKP140-201ENST00000411196 284 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 MTATP6P18-201ENST00000417994 673 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AL158156.1-201ENST00000422509 473 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 MTCO2P19-201ENST00000427513 598 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 RPL23AP30-201ENST00000432419 501 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 MTND1P4-201ENST00000435196 415 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 RPL36AP6-201ENST00000435770 321 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC020550.1-201ENST00000447385 163 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 RN7SL601P-201ENST00000471221 293 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC126182.1-201ENST00000478134 357 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 RPS3AP14-201ENST00000483907 780 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AL049874.1-201ENST00000489560 388 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 RNU6-579P-201ENST00000516879 102 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 SNORA70.24-201ENST00000517233 118 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AP001893.2-201ENST00000526949 202 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AP003034.1-201ENST00000534621 422 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AL359212.1-201ENST00000556608 614 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AP005205.1-201ENST00000563503 508 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AL391646.1-201ENST00000603860 190 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC106900.2-201ENST00000604994 317 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC017083.3-201ENST00000609955 700 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AL359880.1-201ENST00000621879 266 ntBASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.23□□□□□ -1.89
BEST3Q8N1M1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 Y_RNA.22-201ENST00000362492 102 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 RNU6-1120P-201ENST00000362988 108 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 SNORD6-201ENST00000365444 73 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 RPL17P50-201ENST00000396131 546 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 NDUFS5P1-201ENST00000405668 289 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 RNU2-39P-201ENST00000410604 198 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 RPL31P12-201ENST00000422587 358 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 HMGB3P12-201ENST00000438745 556 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC006539.3-201ENST00000454258 129 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 RPL32P34-201ENST00000486380 400 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 PCBP2P3-201ENST00000509726 843 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 RN7SKP258-201ENST00000517151 304 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 NRON-201ENST00000517270 370 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 OR5G4P-201ENST00000525251 760 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 OR4R1P-201ENST00000529879 463 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 TPRKBP2-201ENST00000565969 475 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AC012507.3-201ENST00000603556 477 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 Z84480.1-201ENST00000605131 311 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 AF250324.2-201ENST00000608299 610 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 MIR8058-201ENST00000615737 89 ntBASIC3.22□□□□□ -1.89
BEST3Q8N1M1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 OR4G2P-202ENST00000641004 1759 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms