Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNU6-1181P-201ENST00000384191 106 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 MIR181A1-201ENST00000385026 110 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 RNU6-278P-201ENST00000390945 109 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 AC004866.2-201ENST00000438285 481 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 SNORA59A-201ENST00000459326 152 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 RNU6-579P-201ENST00000516879 102 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 RNU6-445P-201ENST00000516949 107 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 RNU6-64P-201ENST00000517119 105 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 AC109635.4-202ENST00000531666 412 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 SYF2P1-201ENST00000550658 413 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 AC125611.2-201ENST00000551907 647 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 AC124947.2-202ENST00000552735 133 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 MIR98-201ENST00000606724 119 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 AL360181.4-201ENST00000621752 134 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 MIR4275-201ENST00000636486 87 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 MIR7153-201ENST00000637758 57 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 OR5H6-203ENST00000642105 978 ntBASIC3.71□□□□□ -1.82
VPS52Q8N1B4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.71□□□□□ -1.82
VPS52Q8N1B4 AP001350.1-201ENST00000601906 1524 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AL136372.1-201ENST00000403060 228 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 MTATP6P4-201ENST00000427725 675 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC079780.1-201ENST00000428259 207 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 PSPHP1-201ENST00000450062 261 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 RPS15AP36-201ENST00000492022 382 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 PCBP2P3-201ENST00000509726 843 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 SNORA31.22-201ENST00000517204 135 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC090572.1-201ENST00000519251 160 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AL606834.2-201ENST00000602954 668 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AP000860.1-201ENST00000605250 559 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC126118.1-201ENST00000607744 628 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC006338.1-201ENST00000618453 749 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AL158209.2-201ENST00000619266 216 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 AC092326.2-201ENST00000624772 1561 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 CR848007.1-201ENST00000442354 1699 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.7□□□□□ -1.82
VPS52Q8N1B4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
VPS52Q8N1B4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 RNU6-108P-201ENST00000365558 107 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AL136116.1-201ENST00000403591 381 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 ELOCP4-201ENST00000420090 333 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 RPL31P12-201ENST00000422587 358 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 ISCA1P1-201ENST00000426679 387 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 TIMM9P3-201ENST00000428659 274 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 NEK4P1-201ENST00000433383 879 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AL451074.3-201ENST00000437709 472 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 MRPS31P2-201ENST00000451581 518 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC006539.3-201ENST00000454258 129 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 RPS27AP1-201ENST00000475545 471 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 HMGB3P15-201ENST00000507326 574 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 FCF1P8-201ENST00000510322 597 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC010493.1-201ENST00000513479 292 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 RNU6-1220P-201ENST00000517126 108 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC011979.2-201ENST00000527568 352 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 FAM92A1P1-201ENST00000528023 890 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 TGIF1P1-201ENST00000558095 802 ntBASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS52Q8N1B4 AP001094.1-201ENST00000579805 193 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms