Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RNU6-638P-201ENST00000516582 104 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 Y_RNA.706-201ENST00000516933 99 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 AC090151.1-201ENST00000520784 730 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 AP001284.1-201ENST00000528393 2118 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 MIR3667-201ENST00000581025 74 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 AC090616.3-201ENST00000582184 217 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 AC123912.5-201ENST00000605470 343 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 AP002826.1-201ENST00000608835 315 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 MIR6780A-201ENST00000615089 68 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 MIR3658-201ENST00000636291 56 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 MTND5P35-201ENST00000557537 1720 ntBASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NPAS3Q8IXF0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AC125336.1-201ENST00000508893 2827 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 MIR410-201ENST00000362222 80 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 RNA5SP505-201ENST00000364748 108 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 RN7SKP153-201ENST00000365026 316 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AC073264.2-201ENST00000448886 166 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 RBMY2TP-201ENST00000451162 947 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 RN7SKP210-201ENST00000459176 261 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 RNU6-1037P-201ENST00000459571 107 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AC090602.1-201ENST00000469695 252 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AC010631.1-201ENST00000474150 156 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 RPS26P21-201ENST00000475397 348 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 RN7SL319P-201ENST00000480656 221 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 ANXA2P1-201ENST00000505539 926 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 MRPS33P2-201ENST00000507850 322 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 MIR2355-201ENST00000517199 87 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AP006289.1-201ENST00000538089 277 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 MIR5692A1-201ENST00000580523 69 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AC209154.1-201ENST00000582156 337 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 MIR4697-201ENST00000582977 78 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 PRPF19P1-201ENST00000584766 898 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AC008749.1-201ENST00000597650 306 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 NAMPTP1-201ENST00000440465 2514 ntBASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
NPAS3Q8IXF0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 ZNF826P-207ENST00000622273 1910 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AC079741.1-201ENST00000321498 212 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 MIR133A2-201ENST00000347538 102 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 Y_RNA.136-201ENST00000363444 102 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 RN7SKP113-201ENST00000363891 295 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 RNU1-32P-201ENST00000363937 159 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 HSPE1P8-201ENST00000406997 288 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 RNU2-50P-201ENST00000410494 143 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 CBX1P3-201ENST00000413296 527 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 BX323845.1-201ENST00000432417 179 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AL354714.3-201ENST00000447284 493 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AC008481.1-201ENST00000463278 396 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 RN7SL481P-201ENST00000477764 299 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 RNU6-677P-201ENST00000516914 101 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AC091042.1-201ENST00000579213 173 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 DNAJC19P2-201ENST00000593340 302 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AC010632.3-201ENST00000611377 369 ntBASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.29□□□□□ -1.56
NPAS3Q8IXF0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms