Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 PTMAP3-201ENST00000447474 330 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 IFNWP4-201ENST00000453148 294 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 RNU6-677P-201ENST00000516914 101 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 RNU1-54P-201ENST00000517181 120 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 AC008739.3-201ENST00000603262 127 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 AC069200.1-201ENST00000609511 323 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 U73479.1-201ENST00000618062 168 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 AC016588.2-201ENST00000632484 3021 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 SNORA23-201ENST00000365128 182 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 RNU6-715P-201ENST00000365204 103 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 Y_RNA.452-201ENST00000384202 108 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 RNU1-44P-201ENST00000384453 163 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 RNA5SP111-201ENST00000411386 101 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 MTCYBP9-201ENST00000431021 303 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AC108059.2-201ENST00000434626 151 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 NEFMP1-201ENST00000443423 1006 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 RPL29P29-201ENST00000448725 423 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 MIR2053-201ENST00000459295 91 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 snoU13.3-201ENST00000459441 104 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 MTCO2P24-201ENST00000515611 426 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AP006587.4-201ENST00000526053 529 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AL161713.1-201ENST00000555538 145 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AC022655.2-201ENST00000577280 318 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AL121772.2-201ENST00000614331 297 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 MIR6128-201ENST00000615528 109 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 MIR7151-201ENST00000617477 60 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 MTND4P1-201ENST00000457501 1466 ntBASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
USPL1Q5W0Q7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AP001273.1-201ENST00000624493 3152 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 SNORA73.2-201ENST00000364946 201 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 MIR135A2-201ENST00000384854 100 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 MIR449B-201ENST00000384995 97 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 RNU6-817P-201ENST00000391083 104 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 MIR548F4-201ENST00000408515 105 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AC093578.1-201ENST00000415219 368 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 CRYBB2P1-203ENST00000415709 538 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 YME1L1P1-201ENST00000429435 297 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AC004866.2-201ENST00000438285 481 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AL589765.3-201ENST00000446084 462 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AL590399.6-201ENST00000446396 307 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 RNU6-953P-201ENST00000459154 107 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 RPL31P60-201ENST00000478450 367 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 RPS29P19-201ENST00000479709 171 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AC021146.3-201ENST00000511911 260 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 RNU6-390P-201ENST00000516259 103 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 AC120057.2-201ENST00000571520 271 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 MIR3944-201ENST00000581277 108 ntBASIC5.3□□□□□ -1.56
USPL1Q5W0Q7 MIR3668-201ENST00000582138 75 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms