Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC010625.1-201ENST00000511296 403 ntBASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AP003497.1-201ENST00000528472 562 ntBASIC0.83□□□□□ -2.28
RIF1Q5UIP0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AC103810.9-201ENST00000606688 112 ntBASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AC008083.4-201ENST00000615076 444 ntBASIC0.83□□□□□ -2.28
RIF1Q5UIP0 RNU6-234P-201ENST00000365229 104 ntBASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AC074117.2-201ENST00000417130 397 ntBASIC0.83□□□□□ -2.28
RIF1Q5UIP0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 SNORD97-201ENST00000459187 142 ntBASIC0.83□□□□□ -2.28
RIF1Q5UIP0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 SNORA31.23-201ENST00000517219 133 ntBASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AC091057.2-201ENST00000602594 792 ntBASIC0.83□□□□□ -2.28
RIF1Q5UIP0 AC243829.6-201ENST00000612652 106 ntBASIC0.83□□□□□ -2.28
RIF1Q5UIP0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.83□□□□□ -2.28
RIF1Q5UIP0 RNA5SP347-201ENST00000362445 119 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 SNORA62.1-201ENST00000364287 154 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 RNA5SP189-201ENST00000364920 115 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 MIR513A1-201ENST00000385138 129 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 SNORD56-201ENST00000413522 71 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 ARF4P4-201ENST00000439608 520 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 HMGN2P13-201ENST00000476476 274 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 OR4R1P-201ENST00000529879 463 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 OR6C7P-201ENST00000547875 934 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.82□□□□□ -2.28
RIF1Q5UIP0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.82□□□□□ -2.28
RIF1Q5UIP0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.82□□□□□ -2.28
RIF1Q5UIP0 RNU4-31P-201ENST00000384211 141 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 MIR1265-201ENST00000408444 86 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 RNA5SP498-201ENST00000411342 120 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 BX682237.1-201ENST00000415016 335 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 RPL31P63-201ENST00000422565 375 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.82□□□□□ -2.28
RIF1Q5UIP0 AC234775.1-201ENST00000454247 670 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 AC022493.1-201ENST00000492984 337 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 RNU6-351P-201ENST00000516097 100 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 SNORA48.9-201ENST00000516419 162 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 AP006248.3-201ENST00000623580 594 ntBASIC0.82□□□□□ -2.28
RIF1Q5UIP0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.81□□□□□ -2.28
RIF1Q5UIP0 UBBP3-201ENST00000445497 241 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 RPS20P20-201ENST00000460498 340 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC096751.1-202ENST00000502691 1067 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.81□□□□□ -2.28
RIF1Q5UIP0 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.81□□□□□ -2.28
RIF1Q5UIP0 DUXAP4-201ENST00000603046 613 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC138473.1-201ENST00000605717 526 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC012557.2-201ENST00000605919 418 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 FAM157A-202ENST00000615155 405 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC002550.2-201ENST00000621246 394 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC004943.3-201ENST00000624116 600 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC067863.3-201ENST00000624172 122 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC068620.4-201ENST00000636730 1182 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC009902.3-201ENST00000606235 2172 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC073544.1-201ENST00000600110 1595 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 Y_RNA.142-201ENST00000363491 102 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 RNU6-1263P-201ENST00000384601 106 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.81□□□□□ -2.28
RIF1Q5UIP0 RPS6P14-201ENST00000425165 719 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC004854.1-201ENST00000440356 349 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AL161651.1-201ENST00000440882 223 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.81□□□□□ -2.28
RIF1Q5UIP0 RBM43P1-201ENST00000476891 1081 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC090096.1-201ENST00000489168 390 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 CDC42P4-201ENST00000510507 563 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 RNA5SP285-201ENST00000516619 119 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 Y_RNA.700-201ENST00000516806 100 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 HMGB1P46-201ENST00000520062 610 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC087465.1-201ENST00000560574 245 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.81□□□□□ -2.28
RIF1Q5UIP0 CFTRP2-201ENST00000634304 199 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 MTND4P34-201ENST00000572715 1371 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AL589743.1-201ENST00000551932 2712 ntBASIC0.81□□□□□ -2.28
RIF1Q5UIP0 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC0.8□□□□□ -2.28
RIF1Q5UIP0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
RIF1Q5UIP0 Y_RNA.132-201ENST00000363421 102 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 RNY3-201ENST00000365484 102 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 SNORA2A-201ENST00000383885 135 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 RNU6-418P-201ENST00000384035 107 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 RNU6-1320P-201ENST00000390838 107 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 RNU6-1269P-201ENST00000391139 107 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.8□□□□□ -2.28
RIF1Q5UIP0 RNU6-599P-201ENST00000459383 107 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 RNU6-1193P-201ENST00000459461 107 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 RPL31P58-201ENST00000469001 379 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 BTF3P12-201ENST00000519620 469 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.8□□□□□ -2.28
RIF1Q5UIP0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.8□□□□□ -2.28
RIF1Q5UIP0 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RIF1Q5UIP0 YWHAQP7-201ENST00000603536 658 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 AC011468.4-201ENST00000603942 409 ntBASIC0.8□□□□□ -2.28
RIF1Q5UIP0 AC090953.1-201ENST00000604305 1092 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms