Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU2-49P-201ENST00000410666 184 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AL445183.3-201ENST00000414168 502 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 BX510359.4-201ENST00000423750 193 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC58Q4VC31 RPS15AP5-201ENST00000436276 388 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC58Q4VC31 HMGN3P1-201ENST00000453847 193 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 MRPS17P3-201ENST00000465453 385 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 ANXA2P1-201ENST00000505539 926 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AC098591.2-201ENST00000510152 315 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AF213884.2-201ENST00000510417 903 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AC027309.2-201ENST00000520566 192 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC58Q4VC31 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC58Q4VC31 SUMO2P14-201ENST00000604488 293 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AC011330.2-201ENST00000621680 635 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AC084768.2-201ENST00000622736 221 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 AC017104.5-201ENST00000637647 639 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 LINC02211-204ENST00000642024 1070 ntBASIC1.41□□□□□ -2.18
CCDC58Q4VC31 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC58Q4VC31 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.4□□□□□ -2.18
CCDC58Q4VC31 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC58Q4VC31 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC58Q4VC31 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 MIR421-201ENST00000365696 85 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 MIR150-201ENST00000385048 84 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC007098.1-201ENST00000420122 367 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 Z93242.1-201ENST00000427102 353 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AL049734.2-201ENST00000441066 616 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 MTND6P13-201ENST00000443510 523 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC138853.1-201ENST00000503549 823 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC011352.3-201ENST00000505162 593 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC092436.1-201ENST00000506450 503 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC006390.1-201ENST00000508068 283 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 RNU6-491P-201ENST00000516099 110 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 SNORA26.10-201ENST00000516427 141 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AP004607.1-201ENST00000524456 203 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 RANP3-201ENST00000530970 276 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC008269.2-201ENST00000561915 1105 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC105245.1-201ENST00000581934 244 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC58Q4VC31 BNIP3P25-201ENST00000596023 559 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AL589743.7-201ENST00000612637 233 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC009318.4-201ENST00000620496 486 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 AC091925.2-201ENST00000625059 256 ntBASIC1.4□□□□□ -2.19
CCDC58Q4VC31 MIR583-201ENST00000384846 75 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 RNA5SP508-201ENST00000411327 119 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 USP9YP6-201ENST00000413550 854 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 NDUFB4P7-201ENST00000423198 363 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 RPL30P4-201ENST00000429309 333 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 AC092685.1-201ENST00000447960 1243 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 HMGB1P36-201ENST00000487709 576 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 AC069306.1-201ENST00000507006 843 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 SNORA31.6-201ENST00000516241 130 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 RNU6-250P-201ENST00000516958 103 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC58Q4VC31 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC58Q4VC31 MIR4435-1-201ENST00000582552 80 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC58Q4VC31 BNIP3P22-201ENST00000593399 556 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 PRR13P7-201ENST00000605538 430 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 MIR502-201ENST00000606349 86 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC58Q4VC31 AC103710.2-201ENST00000609912 942 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC58Q4VC31 AC006213.4-201ENST00000616184 634 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 AC010149.2-201ENST00000637608 315 ntBASIC1.39□□□□□ -2.19
CCDC58Q4VC31 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC58Q4VC31 RNU6-748P-201ENST00000384648 107 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 AL355615.1-201ENST00000406187 641 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC58Q4VC31 AL445669.1-201ENST00000426743 755 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 GTF2IP7-202ENST00000436677 309 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.38□□□□□ -2.19
CCDC58Q4VC31 MTCO1P48-201ENST00000448024 1096 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC58Q4VC31 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 AC069528.1-202ENST00000482888 637 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.38□□□□□ -2.19
CCDC58Q4VC31 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.38□□□□□ -2.19
CCDC58Q4VC31 OR5AK1P-201ENST00000524837 922 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 AP002748.2-201ENST00000528671 348 ntBASIC1.38□□□□□ -2.19
CCDC58Q4VC31 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms