Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 SNORA67.7-201ENST00000516664 135 ntBASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 MIR3921-201ENST00000577308 85 ntBASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 FGF7P1-201ENST00000582820 288 ntBASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 AC011712.1-201ENST00000588959 234 ntBASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 AC067852.3-201ENST00000589177 561 ntBASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 AC104985.2-201ENST00000620598 500 ntBASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PTCHD3Q3KNS1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC007685.1-201ENST00000329806 452 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 MIR30B-201ENST00000384850 88 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-1009P-201ENST00000390996 107 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-817P-201ENST00000391083 104 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AL590704.1-201ENST00000402856 794 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 RNU4-46P-201ENST00000410818 138 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 ARL5AP1-201ENST00000418991 388 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC245054.1-201ENST00000420944 258 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC018630.2-202ENST00000422992 927 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC093106.2-201ENST00000428212 385 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 NEFMP1-201ENST00000443423 1006 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 MTND1P11-201ENST00000456661 876 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 SNRPFP3-201ENST00000457792 225 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 snoU13.4-201ENST00000458916 104 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 RNU7-180P-201ENST00000459240 63 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 RPL31P13-201ENST00000484151 370 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC108860.1-201ENST00000484521 383 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC104806.1-201ENST00000508720 308 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC023141.12-201ENST00000512399 199 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 SUMO2P20-201ENST00000520803 283 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 OR5B10P-201ENST00000532869 642 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 SNRPGP16-201ENST00000533275 226 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AL355836.1-201ENST00000555951 870 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AL121576.1-201ENST00000556055 276 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC090877.1-201ENST00000561418 344 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC008521.1-201ENST00000587471 187 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 AC009994.1-201ENST00000606889 253 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 FP236240.3-201ENST00000623061 327 ntBASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
PTCHD3Q3KNS1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNU5A-1-201ENST00000362698 116 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-1287P-201ENST00000362914 107 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-797P-201ENST00000363101 109 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 Y_RNA.231-201ENST00000364358 102 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNA5SP97-201ENST00000365006 84 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-38P-201ENST00000384085 107 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-767P-201ENST00000384132 107 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-14P-201ENST00000384630 106 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-1060P-201ENST00000384664 107 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 MIR199A2-201ENST00000385289 110 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 MIR670-201ENST00000390142 98 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 SNORD37.1-201ENST00000390968 65 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-332P-201ENST00000391193 108 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 AL606923.1-201ENST00000406616 190 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 AC009161.1-201ENST00000417306 376 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 CYP4F29P-201ENST00000420685 446 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RPL7P46-201ENST00000425129 740 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 ERLEC1P1-201ENST00000433806 578 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 AC007389.2-201ENST00000434630 306 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RPL23AP31-201ENST00000456160 467 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 AL162395.1-201ENST00000457882 422 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-333P-201ENST00000459117 107 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RNU6-953P-201ENST00000459154 107 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 AC092451.1-201ENST00000480211 153 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 RN7SL323P-201ENST00000494712 295 ntBASIC3.75□□□□□ -1.81
PTCHD3Q3KNS1 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms