Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.22□□□□□ -1.89
EFNB3Q15768 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.22□□□□□ -1.89
EFNB3Q15768 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
EFNB3Q15768 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
EFNB3Q15768 SYF2P1-201ENST00000550658 413 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.22□□□□□ -1.89
EFNB3Q15768 AC090877.1-201ENST00000561418 344 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.22□□□□□ -1.89
EFNB3Q15768 MTCO3P24-201ENST00000572729 782 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 AC024619.4-201ENST00000580924 316 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.22□□□□□ -1.89
EFNB3Q15768 MIR4775-201ENST00000581168 75 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.22□□□□□ -1.89
EFNB3Q15768 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.22□□□□□ -1.89
EFNB3Q15768 NRBF2P5-201ENST00000603087 788 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 AL137849.1-201ENST00000604767 169 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 SNORA62.6-201ENST00000606322 83 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 RNU1-30P-201ENST00000606575 163 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 AC130324.3-201ENST00000614165 542 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
EFNB3Q15768 AC025034.2-201ENST00000623264 286 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 U6.114-201ENST00000636407 96 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
EFNB3Q15768 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
EFNB3Q15768 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
EFNB3Q15768 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
EFNB3Q15768 AP001486.2-201ENST00000561652 5113 ntBASIC3.22□□□□□ -1.89
EFNB3Q15768 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
EFNB3Q15768 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.22□□□□□ -1.89
EFNB3Q15768 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.22□□□□□ -1.89
EFNB3Q15768 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.21□□□□□ -1.89
EFNB3Q15768 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
EFNB3Q15768 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
EFNB3Q15768 Y_RNA.255-201ENST00000364581 97 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 RNU6-996P-201ENST00000365438 107 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 Y_RNA.381-201ENST00000365666 102 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 SNORA69-201ENST00000383895 132 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 SNORA24.1-201ENST00000384401 135 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 MIR670-201ENST00000390142 98 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
EFNB3Q15768 RNA5SP424-201ENST00000390988 115 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AL513331.1-201ENST00000411908 397 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 USP9YP6-201ENST00000413550 854 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.21□□□□□ -1.9
EFNB3Q15768 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.21□□□□□ -1.9
EFNB3Q15768 AC093106.2-201ENST00000428212 385 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 ARF4P2-201ENST00000430209 526 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 MTCO3P18-201ENST00000440206 761 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.21□□□□□ -1.9
EFNB3Q15768 NEFMP1-201ENST00000443423 1006 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 NFU1P2-201ENST00000448700 469 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.21□□□□□ -1.9
EFNB3Q15768 AL049874.1-201ENST00000489560 388 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
EFNB3Q15768 AC108078.2-201ENST00000510750 236 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 SCARNA15.2-201ENST00000516409 127 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AC007991.1-201ENST00000522680 631 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 IGKV2D-19-201ENST00000523346 262 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 OR5AL2P-201ENST00000532185 920 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 MIR5047-201ENST00000579212 100 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AC008752.3-201ENST00000588113 712 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AC067852.3-201ENST00000589177 561 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AL365204.3-201ENST00000612448 685 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
EFNB3Q15768 AL354950.2-201ENST00000617939 290 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
EFNB3Q15768 YWHAEP7-203ENST00000622054 312 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 PLCE1P1-201ENST00000622094 305 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.21□□□□□ -1.9
EFNB3Q15768 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.21□□□□□ -1.9
EFNB3Q15768 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.21□□□□□ -1.9
EFNB3Q15768 AC006020.1-201ENST00000420179 1854 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AC004972.1-201ENST00000623934 2209 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.21□□□□□ -1.9
EFNB3Q15768 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.21□□□□□ -1.9
EFNB3Q15768 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
EFNB3Q15768 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.21□□□□□ -1.9
EFNB3Q15768 NCAPGP1-201ENST00000505112 1814 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 AL672296.1-201ENST00000427780 2158 ntBASIC3.21□□□□□ -1.9
EFNB3Q15768 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
EFNB3Q15768 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
EFNB3Q15768 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
EFNB3Q15768 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
EFNB3Q15768 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.2□□□□□ -1.9
EFNB3Q15768 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
EFNB3Q15768 RNU6-50P-201ENST00000362356 103 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 RNY3P3-201ENST00000363816 102 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 SNORA73.2-201ENST00000364946 201 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 RNU6-61P-201ENST00000365528 109 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 RNA5SP171-201ENST00000391071 115 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 RNU6-817P-201ENST00000391083 104 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 HLFP1-201ENST00000402375 499 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 AL591416.1-201ENST00000404015 867 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.2□□□□□ -1.9
EFNB3Q15768 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 AC114491.1-201ENST00000416095 246 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.2□□□□□ -1.9
EFNB3Q15768 AL035423.1-201ENST00000420331 213 ntBASIC3.2□□□□□ -1.9
EFNB3Q15768 GTF2IP20-201ENST00000431663 360 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms