Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL590233.1-201ENST00000430017 456 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 AC092573.2-201ENST00000434546 243 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 AC092427.1-201ENST00000439177 601 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.76□□□□□ -2.13
FOXF1Q12946 TRGVB-201ENST00000453257 471 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 RPL31P60-201ENST00000478450 367 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.76□□□□□ -2.13
FOXF1Q12946 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
FOXF1Q12946 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.76□□□□□ -2.13
FOXF1Q12946 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.76□□□□□ -2.13
FOXF1Q12946 RN7SKP31-201ENST00000516354 278 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 MIR514B-201ENST00000516774 80 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 RNU6-798P-201ENST00000516912 103 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.76□□□□□ -2.13
FOXF1Q12946 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
FOXF1Q12946 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.76□□□□□ -2.13
FOXF1Q12946 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.76□□□□□ -2.13
FOXF1Q12946 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
FOXF1Q12946 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.76□□□□□ -2.13
FOXF1Q12946 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.76□□□□□ -2.13
FOXF1Q12946 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.76□□□□□ -2.13
FOXF1Q12946 AC068620.3-201ENST00000602749 560 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 AL445435.1-201ENST00000604232 665 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 RNU6-1192P-201ENST00000612197 107 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 AC024257.5-201ENST00000612739 531 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
FOXF1Q12946 RNU6-489P-201ENST00000618289 107 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
FOXF1Q12946 AL138955.1-201ENST00000622881 1040 ntBASIC1.76□□□□□ -2.13
FOXF1Q12946 AL356473.1-201ENST00000406203 1408 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.75□□□□□ -2.13
FOXF1Q12946 CR848007.1-201ENST00000442354 1699 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
FOXF1Q12946 SNORD114-1-201ENST00000362705 72 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 RN7SKP226-201ENST00000364912 300 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.75□□□□□ -2.13
FOXF1Q12946 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
FOXF1Q12946 RNU2-20P-201ENST00000410425 191 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 AL513331.1-201ENST00000411908 397 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.75□□□□□ -2.13
FOXF1Q12946 MTATP6P27-201ENST00000416987 621 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 CCDC58P2-201ENST00000417131 366 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.75□□□□□ -2.13
FOXF1Q12946 MTCO2P5-201ENST00000422621 426 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.75□□□□□ -2.13
FOXF1Q12946 NDUFB4P7-201ENST00000423198 363 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
FOXF1Q12946 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.75□□□□□ -2.13
FOXF1Q12946 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.75□□□□□ -2.13
FOXF1Q12946 MTND4P6-201ENST00000438297 472 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 ARPC3P5-201ENST00000448802 534 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.75□□□□□ -2.13
FOXF1Q12946 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.75□□□□□ -2.13
FOXF1Q12946 RNU7-23P-201ENST00000459465 62 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 AC090515.1-201ENST00000465295 476 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 AC069528.1-202ENST00000482888 637 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 AC104629.1-201ENST00000494226 508 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 RPS27P26-201ENST00000494583 239 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.75□□□□□ -2.13
FOXF1Q12946 AC113420.1-201ENST00000507903 571 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 RNU6-1225P-201ENST00000516336 65 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.75□□□□□ -2.13
FOXF1Q12946 OR5AQ1P-201ENST00000527596 927 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 SLC2A13P1-201ENST00000531560 322 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.75□□□□□ -2.13
FOXF1Q12946 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.75□□□□□ -2.13
FOXF1Q12946 RPS15AP11-201ENST00000594193 385 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 DUXAP11-201ENST00000603858 526 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 AC004853.1-201ENST00000604902 698 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 AC103710.2-201ENST00000609912 942 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 uc_338.20-201ENST00000621563 178 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 MIR4275-201ENST00000636486 87 ntBASIC1.75□□□□□ -2.13
FOXF1Q12946 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
FOXF1Q12946 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
FOXF1Q12946 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
FOXF1Q12946 SET-203ENST00000372688 801 ntTSL 2 BASIC1.74□□□□□ -2.13
FOXF1Q12946 RNU1-52P-201ENST00000384190 164 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 RNU6-1035P-201ENST00000384477 107 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 MIR767-201ENST00000390228 109 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 SNORA40.4-201ENST00000390971 128 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 AL513475.1-201ENST00000406602 315 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 SNORA11.2-201ENST00000408318 127 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 RNU2-47P-201ENST00000410649 186 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 AL358075.3-201ENST00000426289 226 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 TAAR7P-201ENST00000436141 242 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 AP000949.1-201ENST00000438328 629 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 RPL26P6-201ENST00000440913 438 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.74□□□□□ -2.13
FOXF1Q12946 AL513124.1-201ENST00000450410 614 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 AL139109.1-201ENST00000455491 297 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 snoU13.28-201ENST00000459235 104 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 MTND4LP3-201ENST00000468320 276 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 RPL31P41-201ENST00000477967 372 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 AL135752.1-201ENST00000479477 471 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 RPL23AP70-201ENST00000483361 460 ntBASIC1.74□□□□□ -2.13
FOXF1Q12946 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
FOXF1Q12946 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXF1Q12946 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.74□□□□□ -2.13
FOXF1Q12946 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms