Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH1Q08174 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
PCDH1Q08174 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PCDH1Q08174 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH1Q08174 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PCDH1Q08174 Y_RNA.33-201ENST00000362591 102 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 RN7SKP224-201ENST00000364140 325 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.76□□□□□ -1.65
PCDH1Q08174 Y_RNA.471-201ENST00000384312 102 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDH1Q08174 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDH1Q08174 EI24P1-201ENST00000416584 867 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH1Q08174 RPL36AP10-201ENST00000421785 322 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDH1Q08174 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.76□□□□□ -1.65
PCDH1Q08174 AC009963.2-201ENST00000453431 138 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 LINC01399-202ENST00000458450 244 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 TRBVB-201ENST00000477100 408 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.76□□□□□ -1.65
PCDH1Q08174 AC020890.1-201ENST00000491837 504 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 HMGB3P17-201ENST00000504195 649 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 AC008958.1-201ENST00000511047 682 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 RN7SKP66-201ENST00000516681 231 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 RNA5SP392-201ENST00000516905 112 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 AC034114.1-201ENST00000520293 285 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 AC021006.3-201ENST00000530771 192 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDH1Q08174 FKBP1BP1-201ENST00000553366 325 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.76□□□□□ -1.65
PCDH1Q08174 MIR5701-3-201ENST00000578890 82 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDH1Q08174 SNORD84-203ENST00000584275 78 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 MIR5701-1-201ENST00000585138 82 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 AC098826.3-201ENST00000603823 466 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 AC098479.1-201ENST00000609225 154 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 AC093799.2-201ENST00000610062 578 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 MIR5701-2-201ENST00000615634 82 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDH1Q08174 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.76□□□□□ -1.65
PCDH1Q08174 AC063976.2-201ENST00000425667 3556 ntBASIC4.76□□□□□ -1.65
PCDH1Q08174 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH1Q08174 AL391684.1-202ENST00000641293 1636 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH1Q08174 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDH1Q08174 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH1Q08174 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDH1Q08174 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDH1Q08174 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
PCDH1Q08174 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH1Q08174 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH1Q08174 RNU5A-1-201ENST00000362698 116 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 RNU1-106P-201ENST00000384382 164 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 SNORA70.10-201ENST00000384515 134 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 MIR765-201ENST00000390226 114 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PCDH1Q08174 SNORA69.1-201ENST00000390904 137 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 RNU6-700P-201ENST00000391043 107 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH1Q08174 EIF4EP2-201ENST00000422816 654 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 CKS1BP6-201ENST00000424932 240 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 AC004938.1-201ENST00000438468 308 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 CEACAMP7-201ENST00000444105 496 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 TDGF1P1-201ENST00000445734 527 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 AC000111.2-201ENST00000448200 210 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH1Q08174 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH1Q08174 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH1Q08174 NIP7P2-201ENST00000485801 544 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 RNA5SP249-201ENST00000516127 99 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 RNA5SP464-201ENST00000516251 108 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH1Q08174 HMGN2P6-201ENST00000551091 273 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 AC022968.1-201ENST00000567372 442 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDH1Q08174 AC002545.1-201ENST00000592511 181 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 AP000787.2-201ENST00000604432 568 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDH1Q08174 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.75□□□□□ -1.65
PCDH1Q08174 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDH1Q08174 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDH1Q08174 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH1Q08174 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH1Q08174 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.75□□□□□ -1.65
PCDH1Q08174 SDAD1P2-201ENST00000441308 2028 ntBASIC4.75□□□□□ -1.65
PCDH1Q08174 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDH1Q08174 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PCDH1Q08174 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH1Q08174 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
PCDH1Q08174 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PCDH1Q08174 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.75□□□□□ -1.65
PCDH1Q08174 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDH1Q08174 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
PCDH1Q08174 RNU6-1167P-201ENST00000363227 94 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 RNA5SP507-201ENST00000363603 121 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 RNU6-595P-201ENST00000363944 107 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 RNU6-200P-201ENST00000364743 107 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 RNU6-611P-201ENST00000384276 104 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 MIR521-1-201ENST00000384902 87 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms