Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN1BQ07699 AC110491.1-201ENST00000562191 2010 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 AC109446.2-201ENST00000567872 497 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN1BQ07699 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.89□□□□□ -1.95
SCN1BQ07699 MIR548AB-201ENST00000584917 84 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 OR1M4P-201ENST00000589199 287 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 AC019159.1-201ENST00000605094 187 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 RNU6-87P-201ENST00000607561 108 ntBASIC2.89□□□□□ -1.95
SCN1BQ07699 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN1BQ07699 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN1BQ07699 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SCN1BQ07699 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SCN1BQ07699 ELF2P3-201ENST00000445099 1506 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SCN1BQ07699 RNU6-1180P-201ENST00000364935 107 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SCN1BQ07699 RNU6-658P-201ENST00000384606 106 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 MIR554-201ENST00000384874 96 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 MIR887-201ENST00000401258 79 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN1BQ07699 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN1BQ07699 RPL7P34-201ENST00000433316 712 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN1BQ07699 AC119618.1-201ENST00000434191 222 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN1BQ07699 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN1BQ07699 DPPA3P1-201ENST00000448050 469 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.88□□□□□ -1.95
SCN1BQ07699 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN1BQ07699 AC126182.1-201ENST00000478134 357 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AC109486.1-201ENST00000486833 374 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AP002812.1-201ENST00000495378 474 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AC010587.1-201ENST00000505809 469 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 RNU1-95P-201ENST00000516357 160 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 RNU1-128P-201ENST00000516704 160 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AC023632.4-201ENST00000517783 191 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AP003122.4-201ENST00000530980 758 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN1BQ07699 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 MRPS36P5-201ENST00000551909 298 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.88□□□□□ -1.95
SCN1BQ07699 HMGN1P30-201ENST00000589286 268 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AC012065.4-201ENST00000602445 679 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AL355598.1-201ENST00000604169 202 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AL162713.1-201ENST00000604480 262 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN1BQ07699 AL731566.2-201ENST00000618971 317 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AC009878.1-201ENST00000621819 340 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AC091903.1-201ENST00000624322 454 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 AL034408.1-202ENST00000636088 415 ntBASIC2.88□□□□□ -1.95
SCN1BQ07699 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN1BQ07699 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN1BQ07699 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.87□□□□□ -1.95
SCN1BQ07699 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCN1BQ07699 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SCN1BQ07699 RNA5SP197-201ENST00000363357 119 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 RNU6-188P-201ENST00000364207 107 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.87□□□□□ -1.95
SCN1BQ07699 SNORA5A-201ENST00000384111 134 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 RNU5A-2P-201ENST00000384337 116 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SCN1BQ07699 MRPL42P2-201ENST00000403169 426 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 RPS12P24-201ENST00000412619 387 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN1BQ07699 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN1BQ07699 AC007283.2-201ENST00000424739 197 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.87□□□□□ -1.95
SCN1BQ07699 HMGB3P12-201ENST00000438745 556 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN1BQ07699 AC073387.1-201ENST00000453261 709 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 RNU6-953P-201ENST00000459154 107 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.87□□□□□ -1.95
SCN1BQ07699 AC098591.2-201ENST00000510152 315 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 SCARNA17.1-201ENST00000516211 143 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 SCARNA17.2-201ENST00000516334 143 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN1BQ07699 AC103843.2-201ENST00000530523 682 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.87□□□□□ -1.95
SCN1BQ07699 AC135628.1-201ENST00000568867 534 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 MIR3915-201ENST00000578518 97 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC103810.1-201ENST00000579873 453 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC024619.4-201ENST00000580924 316 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC090616.3-201ENST00000582184 217 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC006130.2-201ENST00000586202 326 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 NIFKP6-201ENST00000598115 845 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC073544.2-201ENST00000601155 540 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AL020997.2-201ENST00000602607 184 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC012119.1-201ENST00000603184 222 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC104763.2-201ENST00000604179 382 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.87□□□□□ -1.95
SCN1BQ07699 SCARNA17.4-201ENST00000614296 143 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AL603755.1-201ENST00000619504 163 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AP003485.2-201ENST00000623636 610 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC120349.3-201ENST00000624377 529 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.87□□□□□ -1.95
SCN1BQ07699 MTND5P42-201ENST00000637720 498 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 LRRC77P-213ENST00000637727 880 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 AC099654.13-201ENST00000639774 207 ntBASIC2.87□□□□□ -1.95
SCN1BQ07699 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms