Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RPS4XP3-201ENST00000398541 413 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 RPS4XP7-201ENST00000406274 780 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 CCNG1P1-201ENST00000406783 885 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 AC080125.1-201ENST00000414888 684 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 UBE2FP1-201ENST00000416536 447 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.97□□□□□ -1.93
GABPAQ06546 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.97□□□□□ -1.93
GABPAQ06546 RPL35AP22-201ENST00000436855 335 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.97□□□□□ -1.93
GABPAQ06546 TPT1P14-201ENST00000448018 505 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.97□□□□□ -1.93
GABPAQ06546 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.97□□□□□ -1.93
GABPAQ06546 AP1S2P1-201ENST00000457344 379 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 RNU7-125P-201ENST00000458760 62 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 RPS26P21-201ENST00000475397 348 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 RN7SL297P-201ENST00000483161 293 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 RPS15AP36-201ENST00000492022 382 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.97□□□□□ -1.93
GABPAQ06546 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.97□□□□□ -1.93
GABPAQ06546 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.97□□□□□ -1.93
GABPAQ06546 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.97□□□□□ -1.93
GABPAQ06546 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.97□□□□□ -1.93
GABPAQ06546 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.97□□□□□ -1.93
GABPAQ06546 AC123904.3-201ENST00000547218 814 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 AC128657.1-201ENST00000549459 145 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 AC008015.1-201ENST00000555505 465 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.97□□□□□ -1.93
GABPAQ06546 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.97□□□□□ -1.93
GABPAQ06546 AP001004.1-201ENST00000582468 324 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.97□□□□□ -1.93
GABPAQ06546 AC091965.4-201ENST00000607691 587 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 MIR6076-201ENST00000617521 113 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 AL590808.1-201ENST00000618696 141 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 AP000676.3-201ENST00000623299 569 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 FAM35CP-201ENST00000554755 2470 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
GABPAQ06546 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
GABPAQ06546 AC103988.1-201ENST00000566382 2177 ntBASIC2.97□□□□□ -1.93
GABPAQ06546 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
GABPAQ06546 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
GABPAQ06546 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
GABPAQ06546 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.96□□□□□ -1.94
GABPAQ06546 MIR514A1-201ENST00000385133 98 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 RNU6-1197P-201ENST00000391183 107 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.96□□□□□ -1.94
GABPAQ06546 RPL23AP39-201ENST00000415533 405 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 MTND4P20-201ENST00000424125 869 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.96□□□□□ -1.94
GABPAQ06546 AC233728.2-201ENST00000425348 757 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.96□□□□□ -1.94
GABPAQ06546 AL356867.1-201ENST00000429623 299 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 RPL30P14-201ENST00000482744 348 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.96□□□□□ -1.94
GABPAQ06546 AC010486.1-201ENST00000511793 424 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 AC116347.2-201ENST00000514912 523 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.96□□□□□ -1.94
GABPAQ06546 MIR4435-1-201ENST00000582552 80 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 MIR4307-201ENST00000582802 84 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
GABPAQ06546 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.96□□□□□ -1.94
GABPAQ06546 MTCYBP22-201ENST00000603788 447 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 AC018638.7-201ENST00000605836 1114 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 TUG1_2.1-201ENST00000614234 87 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 AL356266.1-201ENST00000623311 483 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.96□□□□□ -1.94
GABPAQ06546 AC091965.5-201ENST00000624785 342 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.96□□□□□ -1.94
GABPAQ06546 MIR4275-201ENST00000636486 87 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
GABPAQ06546 CCT4P2-201ENST00000233836 1548 ntBASIC2.96□□□□□ -1.94
GABPAQ06546 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
GABPAQ06546 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
GABPAQ06546 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
GABPAQ06546 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.95□□□□□ -1.94
GABPAQ06546 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
GABPAQ06546 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
GABPAQ06546 AC006378.2-201ENST00000623178 2476 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
GABPAQ06546 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.95□□□□□ -1.94
GABPAQ06546 RNU1-39P-201ENST00000383897 165 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 U8.14-201ENST00000390843 143 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 AL359511.1-201ENST00000402970 211 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.95□□□□□ -1.94
GABPAQ06546 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.95□□□□□ -1.94
GABPAQ06546 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.95□□□□□ -1.94
GABPAQ06546 HSPE1P1-201ENST00000421494 318 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 FCF1P1-201ENST00000432690 571 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 NDUFB4P6-201ENST00000436819 366 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 RPL32P28-201ENST00000443577 397 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.95□□□□□ -1.94
GABPAQ06546 AC126182.1-201ENST00000478134 357 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 AC068587.2-201ENST00000478386 781 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 RPS3AP22-201ENST00000488297 769 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.95□□□□□ -1.94
GABPAQ06546 RNU1-41P-201ENST00000516161 162 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 RNU1-48P-201ENST00000516400 162 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 RN7SKP282-201ENST00000516824 299 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 RNU6-711P-201ENST00000517255 106 ntBASIC2.95□□□□□ -1.94
GABPAQ06546 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.95□□□□□ -1.94
GABPAQ06546 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms