Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RPL21P99-201ENST00000480369 423 ntBASIC2.67□□□□□ -1.98
IRX3P78415 EIF4EP3-201ENST00000498782 656 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AC104090.1-201ENST00000506341 1171 ntBASIC2.67□□□□□ -1.98
IRX3P78415 XKRY-201ENST00000510392 1100 ntBASIC2.67□□□□□ -1.98
IRX3P78415 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.67□□□□□ -1.98
IRX3P78415 AC022483.1-201ENST00000514020 567 ntBASIC2.67□□□□□ -1.98
IRX3P78415 MTND2P7-201ENST00000521337 640 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AC022861.1-201ENST00000522981 663 ntBASIC2.67□□□□□ -1.98
IRX3P78415 SLC2A13P1-201ENST00000531560 322 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AC087241.2-201ENST00000535801 324 ntBASIC2.67□□□□□ -1.98
IRX3P78415 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
IRX3P78415 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.67□□□□□ -1.98
IRX3P78415 MED28P6-201ENST00000558776 231 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AC105137.2-201ENST00000569073 466 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AC090615.1-201ENST00000577519 154 ntBASIC2.67□□□□□ -1.98
IRX3P78415 BNIP3P26-201ENST00000600827 554 ntBASIC2.67□□□□□ -1.98
IRX3P78415 APOOP1-201ENST00000604695 592 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AC067747.1-201ENST00000608026 250 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AL596245.1-201ENST00000618994 362 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AC011330.2-201ENST00000621680 635 ntBASIC2.67□□□□□ -1.98
IRX3P78415 PISRT1-201ENST00000626175 531 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AC241585.2-209ENST00000638217 143 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AL022578.1-201ENST00000439330 1433 ntBASIC2.67□□□□□ -1.98
IRX3P78415 AC131280.1-202ENST00000624067 4211 ntBASIC2.66□□□□□ -1.98
IRX3P78415 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
IRX3P78415 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
IRX3P78415 RNU6-882P-201ENST00000391025 103 ntBASIC2.66□□□□□ -1.98
IRX3P78415 SNRPEP2-201ENST00000397592 279 ntBASIC2.66□□□□□ -1.98
IRX3P78415 AL356379.1-201ENST00000414105 126 ntBASIC2.66□□□□□ -1.98
IRX3P78415 AL358075.3-201ENST00000426289 226 ntBASIC2.66□□□□□ -1.98
IRX3P78415 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.66□□□□□ -1.98
IRX3P78415 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.66□□□□□ -1.98
IRX3P78415 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.66□□□□□ -1.98
IRX3P78415 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.66□□□□□ -1.98
IRX3P78415 HMGB1P28-201ENST00000507778 552 ntBASIC2.66□□□□□ -1.98
IRX3P78415 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.66□□□□□ -1.98
IRX3P78415 RNU6-276P-201ENST00000516114 96 ntBASIC2.66□□□□□ -1.98
IRX3P78415 RN7SKP31-201ENST00000516354 278 ntBASIC2.66□□□□□ -1.98
IRX3P78415 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.66□□□□□ -1.98
IRX3P78415 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.66□□□□□ -1.98
IRX3P78415 AC005832.3-201ENST00000537929 631 ntBASIC2.66□□□□□ -1.98
IRX3P78415 GLYCAM1-201ENST00000546596 285 ntBASIC2.66□□□□□ -1.98
IRX3P78415 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.66□□□□□ -1.98
IRX3P78415 BNIP3P27-201ENST00000599991 412 ntBASIC2.66□□□□□ -1.98
IRX3P78415 AC243773.3-201ENST00000613270 256 ntBASIC2.66□□□□□ -1.98
IRX3P78415 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
IRX3P78415 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
IRX3P78415 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.66□□□□□ -1.98
IRX3P78415 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.66□□□□□ -1.98
IRX3P78415 AL359851.1-201ENST00000569460 4997 ntBASIC2.66□□□□□ -1.98
IRX3P78415 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.65□□□□□ -1.98
IRX3P78415 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.65□□□□□ -1.98
IRX3P78415 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
IRX3P78415 RNU6-560P-201ENST00000364007 108 ntBASIC2.65□□□□□ -1.99
IRX3P78415 U8.8-201ENST00000365399 135 ntBASIC2.65□□□□□ -1.99
IRX3P78415 SNORA40.2-201ENST00000390847 128 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AL079342.1-201ENST00000401460 267 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AL450338.1-201ENST00000407987 512 ntBASIC2.65□□□□□ -1.99
IRX3P78415 SNORD23.1-201ENST00000408212 104 ntBASIC2.65□□□□□ -1.99
IRX3P78415 RNU2-42P-201ENST00000410697 113 ntBASIC2.65□□□□□ -1.99
IRX3P78415 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.65□□□□□ -1.99
IRX3P78415 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.65□□□□□ -1.99
IRX3P78415 AL590233.1-201ENST00000430017 456 ntBASIC2.65□□□□□ -1.99
IRX3P78415 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.65□□□□□ -1.99
IRX3P78415 RPS15AP28-201ENST00000435088 386 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.65□□□□□ -1.99
IRX3P78415 DPPA3P1-201ENST00000448050 469 ntBASIC2.65□□□□□ -1.99
IRX3P78415 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.65□□□□□ -1.99
IRX3P78415 AC093752.1-206ENST00000511823 336 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AC112673.1-201ENST00000513168 575 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.65□□□□□ -1.99
IRX3P78415 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.65□□□□□ -1.99
IRX3P78415 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
IRX3P78415 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.65□□□□□ -1.99
IRX3P78415 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.65□□□□□ -1.99
IRX3P78415 LARP7P2-201ENST00000575306 125 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.65□□□□□ -1.99
IRX3P78415 DUXAP11-201ENST00000603858 526 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AL022099.1-201ENST00000604551 712 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.65□□□□□ -1.99
IRX3P78415 AC097504.2-201ENST00000608088 454 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AC107214.2-201ENST00000608204 634 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AF129408.1-201ENST00000608767 431 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AC004852.3-201ENST00000614131 326 ntBASIC2.65□□□□□ -1.99
IRX3P78415 AL357080.1-201ENST00000617394 239 ntBASIC2.65□□□□□ -1.99
IRX3P78415 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.65□□□□□ -1.99
IRX3P78415 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.65□□□□□ -1.99
IRX3P78415 ZNF720P1-201ENST00000562403 1939 ntBASIC2.65□□□□□ -1.99
IRX3P78415 CENPCP1-201ENST00000533085 2578 ntBASIC2.65□□□□□ -1.99
IRX3P78415 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.65□□□□□ -1.99
IRX3P78415 CKAP2P1-201ENST00000555477 2049 ntBASIC2.64□□□□□ -1.99
IRX3P78415 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
IRX3P78415 RNU6-198P-201ENST00000384258 104 ntBASIC2.64□□□□□ -1.99
IRX3P78415 RN7SKP32-201ENST00000410167 303 ntBASIC2.64□□□□□ -1.99
IRX3P78415 TIMM9P2-201ENST00000419324 266 ntBASIC2.64□□□□□ -1.99
IRX3P78415 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.64□□□□□ -1.99
IRX3P78415 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.64□□□□□ -1.99
IRX3P78415 AC234781.2-201ENST00000426370 994 ntBASIC2.64□□□□□ -1.99
IRX3P78415 AC009414.1-201ENST00000427200 443 ntBASIC2.64□□□□□ -1.99
IRX3P78415 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms