Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC008155.2-201ENST00000464337 397 ntBASIC3.1□□□□□ -1.91
CDH13P55290 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AC010424.1-201ENST00000506336 297 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH13P55290 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH13P55290 AC117522.2-201ENST00000510049 657 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.1□□□□□ -1.91
CDH13P55290 RNU7-51P-201ENST00000516560 62 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.1□□□□□ -1.91
CDH13P55290 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH13P55290 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH13P55290 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH13P55290 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.1□□□□□ -1.91
CDH13P55290 AC137800.2-201ENST00000574375 120 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH13P55290 BNIP3P33-201ENST00000598912 569 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AC245389.1-201ENST00000605141 529 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AC245008.1-201ENST00000608123 476 ntBASIC3.1□□□□□ -1.91
CDH13P55290 uc_338.25-201ENST00000613756 156 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AC244100.1-202ENST00000621554 382 ntBASIC3.1□□□□□ -1.91
CDH13P55290 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH13P55290 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH13P55290 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH13P55290 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH13P55290 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CDH13P55290 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CDH13P55290 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH13P55290 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CDH13P55290 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CDH13P55290 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.91
CDH13P55290 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH13P55290 SNORD56.2-201ENST00000363242 71 ntBASIC3.09□□□□□ -1.91
CDH13P55290 RNY4P34-201ENST00000364779 95 ntBASIC3.09□□□□□ -1.91
CDH13P55290 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDH13P55290 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CDH13P55290 RNU6-701P-201ENST00000384059 107 ntBASIC3.09□□□□□ -1.91
CDH13P55290 RNU6-817P-201ENST00000391083 104 ntBASIC3.09□□□□□ -1.91
CDH13P55290 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH13P55290 RPS3AP36-201ENST00000398190 775 ntBASIC3.09□□□□□ -1.91
CDH13P55290 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH13P55290 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH13P55290 NDUFB4P5-201ENST00000415445 361 ntBASIC3.09□□□□□ -1.91
CDH13P55290 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.09□□□□□ -1.91
CDH13P55290 ELOCP4-201ENST00000420090 333 ntBASIC3.09□□□□□ -1.91
CDH13P55290 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.09□□□□□ -1.91
CDH13P55290 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH13P55290 HMGB1P27-201ENST00000431429 603 ntBASIC3.09□□□□□ -1.91
CDH13P55290 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH13P55290 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.09□□□□□ -1.91
CDH13P55290 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH13P55290 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH13P55290 AC010099.1-201ENST00000455434 375 ntBASIC3.09□□□□□ -1.91
CDH13P55290 MTND4LP3-201ENST00000468320 276 ntBASIC3.09□□□□□ -1.91
CDH13P55290 AP002812.1-201ENST00000495378 474 ntBASIC3.09□□□□□ -1.91
CDH13P55290 Vault.3-201ENST00000516676 95 ntBASIC3.09□□□□□ -1.91
CDH13P55290 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH13P55290 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH13P55290 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.09□□□□□ -1.91
CDH13P55290 MIR3158-1-201ENST00000583596 81 ntBASIC3.09□□□□□ -1.91
CDH13P55290 AC006504.3-201ENST00000586818 523 ntBASIC3.09□□□□□ -1.91
CDH13P55290 AC174048.1-201ENST00000603389 144 ntBASIC3.09□□□□□ -1.91
CDH13P55290 AC136601.2-201ENST00000604356 474 ntBASIC3.09□□□□□ -1.91
CDH13P55290 AP002360.4-201ENST00000606980 481 ntBASIC3.09□□□□□ -1.91
CDH13P55290 AC100793.4-201ENST00000613683 429 ntBASIC3.09□□□□□ -1.91
CDH13P55290 AC007998.5-201ENST00000622938 237 ntBASIC3.09□□□□□ -1.91
CDH13P55290 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDH13P55290 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH13P55290 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CDH13P55290 RNU6-1167P-201ENST00000363227 94 ntBASIC3.08□□□□□ -1.92
CDH13P55290 RNU6-270P-201ENST00000364131 105 ntBASIC3.08□□□□□ -1.92
CDH13P55290 RNY1P12-201ENST00000364251 105 ntBASIC3.08□□□□□ -1.92
CDH13P55290 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH13P55290 AC127391.1-201ENST00000411737 98 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH13P55290 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.08□□□□□ -1.92
CDH13P55290 ZNF863P-201ENST00000426746 417 ntBASIC3.08□□□□□ -1.92
CDH13P55290 DPPA2P1-201ENST00000428060 556 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AC073614.1-201ENST00000438690 650 ntBASIC3.08□□□□□ -1.92
CDH13P55290 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH13P55290 AP000936.2-201ENST00000447151 681 ntBASIC3.08□□□□□ -1.92
CDH13P55290 MTND1P29-201ENST00000448112 647 ntBASIC3.08□□□□□ -1.92
CDH13P55290 SNRPGP6-201ENST00000451124 220 ntBASIC3.08□□□□□ -1.92
CDH13P55290 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH13P55290 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH13P55290 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH13P55290 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CDH13P55290 MTND4P2-201ENST00000507767 1203 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH13P55290 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDH13P55290 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH13P55290 SNORA67.7-201ENST00000516664 135 ntBASIC3.08□□□□□ -1.92
CDH13P55290 SNORA18.6-201ENST00000516792 115 ntBASIC3.08□□□□□ -1.92
CDH13P55290 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CDH13P55290 AP000867.2-201ENST00000532468 320 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.08□□□□□ -1.92
CDH13P55290 AC040904.1-201ENST00000590850 223 ntBASIC3.08□□□□□ -1.92
CDH13P55290 GLUD1P4-201ENST00000590914 418 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AC119751.7-201ENST00000600494 245 ntBASIC3.08□□□□□ -1.92
CDH13P55290 DPPA3P3-201ENST00000603842 430 ntBASIC3.08□□□□□ -1.92
CDH13P55290 AC073657.2-201ENST00000605661 303 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms