Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RPL23AP82-202ENST00000427528 469 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIMK1P53667 ATP5C1P1-201ENST00000441945 895 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 MTCO3P45-201ENST00000443036 613 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 COX6CP12-201ENST00000446748 202 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.2□□□□□ -1.9
LIMK1P53667 MTND3P7-201ENST00000474435 343 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.2□□□□□ -1.9
LIMK1P53667 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.2□□□□□ -1.9
LIMK1P53667 OR5BM1P-201ENST00000512021 366 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AC114797.1-201ENST00000514003 728 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AC008885.1-201ENST00000514930 301 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 SNORA31.21-201ENST00000517180 77 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 RNA5SP380-201ENST00000517190 98 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.2□□□□□ -1.9
LIMK1P53667 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.2□□□□□ -1.9
LIMK1P53667 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.2□□□□□ -1.9
LIMK1P53667 AC124947.2-202ENST00000552735 133 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 GTF3AP2-201ENST00000557014 266 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AL356432.3-201ENST00000568952 465 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AC005951.2-201ENST00000576282 495 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.2□□□□□ -1.9
LIMK1P53667 AC083760.1-201ENST00000589621 670 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AC002545.1-201ENST00000592511 181 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 Z99497.2-201ENST00000603634 310 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AC019159.1-201ENST00000605094 187 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AL157817.1-201ENST00000614264 790 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AC013476.2-201ENST00000614456 459 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 AL356321.1-201ENST00000621360 228 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 SDAD1P2-201ENST00000441308 2028 ntBASIC3.2□□□□□ -1.9
LIMK1P53667 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LIMK1P53667 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIMK1P53667 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LIMK1P53667 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.19□□□□□ -1.9
LIMK1P53667 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LIMK1P53667 MIR148B-201ENST00000362252 99 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 RNU5A-8P-201ENST00000364102 114 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 RNU5E-5P-201ENST00000365379 116 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LIMK1P53667 SNORA7.4-201ENST00000384249 137 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 RPL17P12-201ENST00000413391 526 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.19□□□□□ -1.9
LIMK1P53667 USP12PX-201ENST00000432383 1057 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.19□□□□□ -1.9
LIMK1P53667 USP9YP12-201ENST00000450481 570 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK1P53667 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK1P53667 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.19□□□□□ -1.9
LIMK1P53667 RN7SL432P-201ENST00000484057 298 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 CDC42P4-201ENST00000510507 563 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 SCARNA15.2-201ENST00000516409 127 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 CASP1P1-201ENST00000526345 212 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 DEFB108A-201ENST00000530110 222 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 AC123904.2-201ENST00000548059 300 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.19□□□□□ -1.9
LIMK1P53667 AC010620.2-201ENST00000600135 313 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 KC877982.1-201ENST00000602313 470 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 AL022161.1-201ENST00000604390 213 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 AC121247.2-201ENST00000604776 136 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 AC008277.2-201ENST00000605196 797 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 AL031775.1-201ENST00000607014 887 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 AC004852.3-201ENST00000614131 326 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 AC009159.1-201ENST00000618386 642 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.19□□□□□ -1.9
LIMK1P53667 AL136313.1-201ENST00000624804 202 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 AC110079.1-202ENST00000635213 138 ntBASIC3.19□□□□□ -1.9
LIMK1P53667 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LIMK1P53667 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LIMK1P53667 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
LIMK1P53667 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LIMK1P53667 AC000403.1-201ENST00000613696 3585 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.18□□□□□ -1.9
LIMK1P53667 AC004972.1-201ENST00000623934 2209 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LIMK1P53667 RNU6-198P-201ENST00000384258 104 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 SNORD116-8-201ENST00000384365 95 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 MIR325-201ENST00000385260 98 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 FCF1P10-201ENST00000407590 479 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.18□□□□□ -1.9
LIMK1P53667 ELOCP17-201ENST00000414751 326 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK1P53667 AC006366.1-201ENST00000422002 759 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 NDUFB4P7-201ENST00000423198 363 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.18□□□□□ -1.9
LIMK1P53667 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK1P53667 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.18□□□□□ -1.9
LIMK1P53667 ISCA1P2-201ENST00000438679 421 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK1P53667 AL049734.2-201ENST00000441066 616 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 UBBP3-201ENST00000445497 241 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK1P53667 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.18□□□□□ -1.9
LIMK1P53667 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.18□□□□□ -1.9
LIMK1P53667 RNU6-420P-201ENST00000458780 107 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 AC116337.2-201ENST00000477662 156 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.18□□□□□ -1.9
LIMK1P53667 AC114967.1-201ENST00000504890 259 ntBASIC3.18□□□□□ -1.9
LIMK1P53667 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LIMK1P53667 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms