Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCN3P51790 HMGB3P23-201ENST00000414981 585 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AL159169.1-201ENST00000421119 127 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCN3P51790 HMGN2P16-201ENST00000456802 261 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCN3P51790 MTCO2P29-201ENST00000465212 189 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCN3P51790 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCN3P51790 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLCN3P51790 ARL2BPP6-201ENST00000512757 439 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 Y_RNA.672-201ENST00000516289 104 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 RNU6-1178P-201ENST00000516674 107 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 RNU6-430P-201ENST00000517078 107 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 RN7SKP289-201ENST00000517244 295 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCN3P51790 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.47□□□□□ -1.85
CLCN3P51790 MIR4425-201ENST00000580572 84 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 MIR3118-1-201ENST00000581787 76 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AP002826.1-201ENST00000608835 315 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AC135507.2-201ENST00000612443 309 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AC099506.2-201ENST00000623074 221 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AC091903.1-201ENST00000624322 454 ntBASIC3.47□□□□□ -1.85
CLCN3P51790 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CLCN3P51790 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.47□□□□□ -1.85
CLCN3P51790 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CLCN3P51790 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCN3P51790 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.47□□□□□ -1.85
CLCN3P51790 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.47□□□□□ -1.85
CLCN3P51790 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.46□□□□□ -1.85
CLCN3P51790 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
CLCN3P51790 AF117829.1-206ENST00000621883 3802 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.46□□□□□ -1.86
CLCN3P51790 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCN3P51790 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCN3P51790 SNORA23-201ENST00000365128 182 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 RNU5A-6P-201ENST00000384136 116 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 MRPL42P2-201ENST00000403169 426 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AL122016.1-201ENST00000403365 367 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 MIR548F1-201ENST00000408667 84 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 SPA17P1-201ENST00000416656 452 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.46□□□□□ -1.86
CLCN3P51790 AC005094.1-201ENST00000440420 368 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 MTCO3P45-201ENST00000443036 613 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 GAPDHP17-201ENST00000449858 1001 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.46□□□□□ -1.86
CLCN3P51790 HSPE1P6-201ENST00000479457 291 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 RPL9P6-201ENST00000492764 598 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.46□□□□□ -1.86
CLCN3P51790 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CLCN3P51790 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CLCN3P51790 AL359273.1-201ENST00000510918 627 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.46□□□□□ -1.86
CLCN3P51790 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
CLCN3P51790 SNORA70.14-201ENST00000516205 110 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 RNU6-506P-201ENST00000516553 94 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.46□□□□□ -1.86
CLCN3P51790 AP005205.1-201ENST00000563503 508 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.46□□□□□ -1.86
CLCN3P51790 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.46□□□□□ -1.86
CLCN3P51790 NRBF2P1-201ENST00000587407 859 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 HMGN1P30-201ENST00000589286 268 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.46□□□□□ -1.86
CLCN3P51790 AL137843.1-201ENST00000605078 385 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AC091953.2-201ENST00000623979 160 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.46□□□□□ -1.86
CLCN3P51790 OR5AK4P-201ENST00000635912 903 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CLCN3P51790 AC066616.2-201ENST00000559334 1481 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.46□□□□□ -1.86
CLCN3P51790 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.46□□□□□ -1.86
CLCN3P51790 FARSBP1-201ENST00000435808 1778 ntBASIC3.46□□□□□ -1.86
CLCN3P51790 AC007496.3-201ENST00000624987 3443 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 EXOC5P1-201ENST00000510543 1969 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLCN3P51790 U8.3-201ENST00000363321 132 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 SNORA36C-201ENST00000384289 132 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 SNORD67-201ENST00000390833 111 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CLCN3P51790 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.45□□□□□ -1.86
CLCN3P51790 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.45□□□□□ -1.86
CLCN3P51790 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.45□□□□□ -1.86
CLCN3P51790 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.45□□□□□ -1.86
CLCN3P51790 UBE2V1P8-201ENST00000437166 265 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 AC016696.1-201ENST00000446949 318 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.45□□□□□ -1.86
CLCN3P51790 AP001486.1-201ENST00000463339 476 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 RPS15AP36-201ENST00000492022 382 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CLCN3P51790 AC108078.1-201ENST00000508073 725 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.45□□□□□ -1.86
CLCN3P51790 RN7SKP60-201ENST00000516985 239 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 AC009812.2-201ENST00000517657 457 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 AC107934.1-201ENST00000522215 217 ntBASIC3.45□□□□□ -1.86
CLCN3P51790 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.45□□□□□ -1.86
CLCN3P51790 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms