Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.57□□□□□ -2
CASP4P49662 AC106883.1-201ENST00000418805 562 ntBASIC2.57□□□□□ -2
CASP4P49662 ZNF863P-201ENST00000426746 417 ntBASIC2.57□□□□□ -2
CASP4P49662 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.57□□□□□ -2
CASP4P49662 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.57□□□□□ -2
CASP4P49662 COX7BP2-201ENST00000437976 242 ntBASIC2.57□□□□□ -2
CASP4P49662 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.57□□□□□ -2
CASP4P49662 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.57□□□□□ -2
CASP4P49662 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.57□□□□□ -2
CASP4P49662 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.57□□□□□ -2
CASP4P49662 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.57□□□□□ -2
CASP4P49662 AL513328.1-201ENST00000446460 224 ntBASIC2.57□□□□□ -2
CASP4P49662 EEF1E1P1-201ENST00000446998 430 ntBASIC2.57□□□□□ -2
CASP4P49662 AC009961.3-201ENST00000449832 765 ntBASIC2.57□□□□□ -2
CASP4P49662 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.57□□□□□ -2
CASP4P49662 UBE2DNL-203ENST00000474922 222 ntBASIC2.57□□□□□ -2
CASP4P49662 RPL7P18-201ENST00000478965 734 ntBASIC2.57□□□□□ -2
CASP4P49662 RN7SL636P-201ENST00000497504 294 ntBASIC2.57□□□□□ -2
CASP4P49662 AC138853.1-201ENST00000503549 823 ntBASIC2.57□□□□□ -2
CASP4P49662 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.57□□□□□ -2
CASP4P49662 CDC42P4-201ENST00000510507 563 ntBASIC2.57□□□□□ -2
CASP4P49662 AC008716.1-201ENST00000511084 513 ntBASIC2.57□□□□□ -2
CASP4P49662 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
CASP4P49662 NRON-201ENST00000517270 370 ntBASIC2.57□□□□□ -2
CASP4P49662 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.57□□□□□ -2
CASP4P49662 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.57□□□□□ -2
CASP4P49662 SUB1P1-201ENST00000524415 382 ntBASIC2.57□□□□□ -2
CASP4P49662 AP001646.1-201ENST00000527936 915 ntBASIC2.57□□□□□ -2
CASP4P49662 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CASP4P49662 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.57□□□□□ -2
CASP4P49662 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.57□□□□□ -2
CASP4P49662 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.57□□□□□ -2
CASP4P49662 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.57□□□□□ -2
CASP4P49662 AC009097.3-201ENST00000563557 1018 ntBASIC2.57□□□□□ -2
CASP4P49662 AC005951.2-201ENST00000576282 495 ntBASIC2.57□□□□□ -2
CASP4P49662 AC005498.1-201ENST00000592125 465 ntBASIC2.57□□□□□ -2
CASP4P49662 TPMTP1-201ENST00000592307 737 ntBASIC2.57□□□□□ -2
CASP4P49662 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.57□□□□□ -2
CASP4P49662 AL139344.1-201ENST00000605228 195 ntBASIC2.57□□□□□ -2
CASP4P49662 AC112220.3-201ENST00000605502 502 ntBASIC2.57□□□□□ -2
CASP4P49662 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.57□□□□□ -2
CASP4P49662 AC097478.2-201ENST00000610572 514 ntBASIC2.57□□□□□ -2
CASP4P49662 AL133445.2-201ENST00000611191 527 ntBASIC2.57□□□□□ -2
CASP4P49662 SDR42E1P2-201ENST00000614861 481 ntBASIC2.57□□□□□ -2
CASP4P49662 AC010133.1-201ENST00000615809 842 ntBASIC2.57□□□□□ -2
CASP4P49662 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.57□□□□□ -2
CASP4P49662 AC099063.3-201ENST00000642066 185 ntBASIC2.57□□□□□ -2
CASP4P49662 AP000776.1-201ENST00000530032 1663 ntBASIC2.57□□□□□ -2
CASP4P49662 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.56□□□□□ -2
CASP4P49662 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.56□□□□□ -2
CASP4P49662 MIR449A-201ENST00000362113 91 ntBASIC2.56□□□□□ -2
CASP4P49662 RNA5SP393-201ENST00000363423 117 ntBASIC2.56□□□□□ -2
CASP4P49662 RNU6-853P-201ENST00000364306 107 ntBASIC2.56□□□□□ -2
CASP4P49662 OR5H15-201ENST00000383696 930 ntBASIC2.56□□□□□ -2
CASP4P49662 RNU6-906P-201ENST00000384700 70 ntBASIC2.56□□□□□ -2
CASP4P49662 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.56□□□□□ -2
CASP4P49662 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.56□□□□□ -2
CASP4P49662 RN7SKP140-201ENST00000411196 284 ntBASIC2.56□□□□□ -2
CASP4P49662 AL513331.1-201ENST00000411908 397 ntBASIC2.56□□□□□ -2
CASP4P49662 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.56□□□□□ -2
CASP4P49662 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.56□□□□□ -2
CASP4P49662 AC007919.1-201ENST00000429380 217 ntBASIC2.56□□□□□ -2
CASP4P49662 AC004854.1-201ENST00000440356 349 ntBASIC2.56□□□□□ -2
CASP4P49662 DDX3P2-201ENST00000446138 111 ntBASIC2.56□□□□□ -2
CASP4P49662 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.56□□□□□ -2
CASP4P49662 LINC00888-204ENST00000487386 421 ntBASIC2.56□□□□□ -2
CASP4P49662 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.56□□□□□ -2
CASP4P49662 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.56□□□□□ -2
CASP4P49662 OR5BM1P-201ENST00000512021 366 ntBASIC2.56□□□□□ -2
CASP4P49662 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.56□□□□□ -2
CASP4P49662 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.56□□□□□ -2
CASP4P49662 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.56□□□□□ -2
CASP4P49662 AC110760.3-202ENST00000515177 371 ntBASIC2.56□□□□□ -2
CASP4P49662 AL357094.1-201ENST00000603845 844 ntBASIC2.56□□□□□ -2
CASP4P49662 AL592221.1-201ENST00000605266 382 ntBASIC2.56□□□□□ -2
CASP4P49662 RNU6-88P-201ENST00000606801 100 ntBASIC2.56□□□□□ -2
CASP4P49662 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CASP4P49662 AC093838.1-201ENST00000613014 469 ntBASIC2.56□□□□□ -2
CASP4P49662 TUG1_2.1-201ENST00000614234 87 ntBASIC2.56□□□□□ -2
CASP4P49662 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.56□□□□□ -2
CASP4P49662 UCA1.1-201ENST00000620952 75 ntBASIC2.56□□□□□ -2
CASP4P49662 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.56□□□□□ -2
CASP4P49662 AL160394.1-201ENST00000624765 724 ntBASIC2.56□□□□□ -2
CASP4P49662 PCMTD1P7-201ENST00000634506 357 ntBASIC2.56□□□□□ -2
CASP4P49662 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.56□□□□□ -2
CASP4P49662 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CASP4P49662 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.55□□□□□ -2
CASP4P49662 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CASP4P49662 RNU1-39P-201ENST00000383897 165 ntBASIC2.55□□□□□ -2
CASP4P49662 AL109755.1-201ENST00000401791 649 ntBASIC2.55□□□□□ -2
CASP4P49662 MTCO1P17-201ENST00000411522 491 ntBASIC2.55□□□□□ -2
CASP4P49662 MTCO2P8-201ENST00000412213 658 ntBASIC2.55□□□□□ -2
CASP4P49662 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.55□□□□□ -2
CASP4P49662 AL451054.2-201ENST00000420896 202 ntBASIC2.55□□□□□ -2
CASP4P49662 AL358075.3-201ENST00000426289 226 ntBASIC2.55□□□□□ -2
CASP4P49662 AC092427.1-202ENST00000430569 476 ntBASIC2.55□□□□□ -2
CASP4P49662 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.55□□□□□ -2
CASP4P49662 AC084290.1-201ENST00000434995 374 ntBASIC2.55□□□□□ -2
CASP4P49662 RPS15AP28-201ENST00000435088 386 ntBASIC2.55□□□□□ -2
CASP4P49662 AC018634.1-201ENST00000437554 401 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms