Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC010587.2-201ENST00000511727 448 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AC109445.1-201ENST00000512356 383 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 MTND2P32-201ENST00000521584 1038 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 CKS1BP7-201ENST00000522230 235 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CX3CR1P49238 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.26□□□□□ -2.05
CX3CR1P49238 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AL356280.1-201ENST00000603614 379 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AC245297.2-201ENST00000610119 565 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CX3CR1P49238 SNHG22-203ENST00000617833 660 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AC013470.4-201ENST00000619978 986 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 AP000484.1-201ENST00000620067 1252 ntBASIC2.26□□□□□ -2.05
CX3CR1P49238 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.26□□□□□ -2.05
CX3CR1P49238 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.26□□□□□ -2.05
CX3CR1P49238 AC099786.3-201ENST00000565735 1410 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.25□□□□□ -2.05
CX3CR1P49238 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
CX3CR1P49238 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
CX3CR1P49238 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CX3CR1P49238 SNORD62.1-201ENST00000362541 86 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 Y_RNA.333-201ENST00000365274 102 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 SNORA70.4-201ENST00000365509 134 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
CX3CR1P49238 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
CX3CR1P49238 SNORA48.2-201ENST00000390926 124 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 RNU6-757P-201ENST00000410334 100 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 RNU6-1328P-201ENST00000410938 106 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 PIGPP2-201ENST00000411569 458 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.25□□□□□ -2.05
CX3CR1P49238 HMGB1P49-201ENST00000418882 569 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 PAXBP1P1-201ENST00000449315 447 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.25□□□□□ -2.05
CX3CR1P49238 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.25□□□□□ -2.05
CX3CR1P49238 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.25□□□□□ -2.05
CX3CR1P49238 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.25□□□□□ -2.05
CX3CR1P49238 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.25□□□□□ -2.05
CX3CR1P49238 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.25□□□□□ -2.05
CX3CR1P49238 RNU6-390P-201ENST00000516259 103 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 RNA5SP290-201ENST00000517133 127 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 SCARNA11.3-201ENST00000517276 130 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AC025881.1-201ENST00000518851 512 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.25□□□□□ -2.05
CX3CR1P49238 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.25□□□□□ -2.05
CX3CR1P49238 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.25□□□□□ -2.05
CX3CR1P49238 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.25□□□□□ -2.05
CX3CR1P49238 MTCO2P15-201ENST00000532655 656 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 OR5BN1P-201ENST00000532955 829 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AC023538.1-201ENST00000534576 736 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.25□□□□□ -2.05
CX3CR1P49238 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CX3CR1P49238 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.25□□□□□ -2.05
CX3CR1P49238 AC009163.5-201ENST00000575421 637 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 MIR4446-201ENST00000578505 67 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 MIR4658-201ENST00000584344 65 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AP000403.1-201ENST00000603349 851 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.25□□□□□ -2.05
CX3CR1P49238 AC239868.4-201ENST00000608318 671 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 OR10AB1P-201ENST00000609613 938 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AC104237.2-201ENST00000612456 443 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AL050303.3-201ENST00000613704 284 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 ZNF833P-201ENST00000424938 1494 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 AC009902.3-201ENST00000606235 2172 ntBASIC2.25□□□□□ -2.05
CX3CR1P49238 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CX3CR1P49238 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CX3CR1P49238 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
CX3CR1P49238 RNU6-859P-201ENST00000362728 107 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 RNA5SP393-201ENST00000363423 117 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 RNU6-853P-201ENST00000364306 107 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CR1P49238 RNU6-750P-201ENST00000390946 107 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 AL360182.1-201ENST00000397433 468 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 CCNG1P1-201ENST00000406783 885 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CR1P49238 BTF3L4P3-201ENST00000418879 476 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CR1P49238 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CR1P49238 TXNL1P1-201ENST00000429528 554 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 AC107083.1-201ENST00000439643 279 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 MTCO3P45-201ENST00000443036 613 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 TPT1P14-201ENST00000448018 505 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CR1P49238 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.24□□□□□ -2.05
CX3CR1P49238 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.24□□□□□ -2.05
CX3CR1P49238 AC096725.1-201ENST00000514266 313 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 RNA5SP402-201ENST00000517148 110 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CR1P49238 AL359212.1-201ENST00000556608 614 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CR1P49238 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CR1P49238 AC022662.1-201ENST00000580252 331 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 AC060771.1-201ENST00000582031 164 ntBASIC2.24□□□□□ -2.05
CX3CR1P49238 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.24□□□□□ -2.05
CX3CR1P49238 RPL12P50-201ENST00000603116 116 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms