Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNA5SP320-201ENST00000516263 124 ntBASIC3.04□□□□□ -1.92
NEDD4P46934 AC025881.1-201ENST00000518851 512 ntBASIC3.04□□□□□ -1.92
NEDD4P46934 MTND4LP18-201ENST00000526864 291 ntBASIC3.04□□□□□ -1.92
NEDD4P46934 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.04□□□□□ -1.92
NEDD4P46934 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NEDD4P46934 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.04□□□□□ -1.92
NEDD4P46934 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.04□□□□□ -1.92
NEDD4P46934 AC060771.1-201ENST00000582031 164 ntBASIC3.04□□□□□ -1.92
NEDD4P46934 AC110760.3-201ENST00000598794 467 ntBASIC3.04□□□□□ -1.92
NEDD4P46934 AC010620.1-201ENST00000601088 1102 ntBASIC3.04□□□□□ -1.92
NEDD4P46934 AC090425.2-201ENST00000608818 501 ntBASIC3.04□□□□□ -1.92
NEDD4P46934 AC092125.1-201ENST00000562568 1995 ntBASIC3.04□□□□□ -1.92
NEDD4P46934 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.04□□□□□ -1.92
NEDD4P46934 AC092447.7-201ENST00000422212 1621 ntBASIC3.04□□□□□ -1.92
NEDD4P46934 ELL2P3-201ENST00000457883 1602 ntBASIC3.04□□□□□ -1.92
NEDD4P46934 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.03□□□□□ -1.92
NEDD4P46934 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD4P46934 RNU6-50P-201ENST00000362356 103 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 RNU4-21P-201ENST00000362802 126 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 RNU6-223P-201ENST00000362830 107 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 RNU5F-6P-201ENST00000362979 116 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 MIR196B-201ENST00000384852 84 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 RPS4XP8-201ENST00000402039 771 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 AL031121.1-201ENST00000406553 254 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.03□□□□□ -1.92
NEDD4P46934 AC233728.2-201ENST00000425348 757 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 AC244035.1-201ENST00000430042 390 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD4P46934 AC129850.1-201ENST00000436203 508 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 MTND2P22-201ENST00000444325 1033 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 RAC1P7-201ENST00000445367 377 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 COX6CP12-201ENST00000446748 202 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 EPS15P1-201ENST00000448836 336 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD4P46934 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD4P46934 SNRPFP4-201ENST00000456366 242 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 MTCO1P42-201ENST00000457379 726 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 UBE2DNL-203ENST00000474922 222 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 AP000797.1-201ENST00000478870 387 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 AC112204.1-201ENST00000502591 103 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD4P46934 RNA5SP468-201ENST00000516782 93 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 RPL12P22-201ENST00000519073 490 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 CKS1BP7-201ENST00000522230 235 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD4P46934 AL356057.1-201ENST00000533798 831 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD4P46934 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD4P46934 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD4P46934 ACTR3BP3-201ENST00000565577 979 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 AC234778.2-201ENST00000566241 354 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD4P46934 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.03□□□□□ -1.92
NEDD4P46934 RPL12P50-201ENST00000603116 116 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 Z94722.1-201ENST00000604328 474 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 AL031775.1-201ENST00000607014 887 ntBASIC3.03□□□□□ -1.92
NEDD4P46934 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD4P46934 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.03□□□□□ -1.92
NEDD4P46934 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
NEDD4P46934 AC009812.4-201ENST00000569134 1805 ntBASIC3.03□□□□□ -1.93
NEDD4P46934 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEDD4P46934 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 RNU4-91P-201ENST00000364778 135 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 MIR518C-201ENST00000384822 101 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 MIR592-201ENST00000384959 97 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 SNORD115.1-201ENST00000391109 76 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 SNORA26.8-201ENST00000391306 124 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 RNU6-516P-201ENST00000411381 104 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 NPM1P11-201ENST00000417106 855 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 SSXP9-201ENST00000417503 292 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 AC079780.1-201ENST00000428259 207 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 OR4K11P-201ENST00000431829 904 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 TRIM60P18-201ENST00000441518 828 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 MTND2P4-201ENST00000445034 1004 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 GDI2P2-201ENST00000445131 608 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEDD4P46934 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.02□□□□□ -1.93
NEDD4P46934 AC091179.1-201ENST00000461606 579 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.02□□□□□ -1.93
NEDD4P46934 RPS27P27-201ENST00000498779 255 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.02□□□□□ -1.93
NEDD4P46934 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.02□□□□□ -1.93
NEDD4P46934 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.02□□□□□ -1.93
NEDD4P46934 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.02□□□□□ -1.93
NEDD4P46934 PIGPP4-201ENST00000584447 307 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 UBE2L4-201ENST00000587688 464 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 OR10AB1P-201ENST00000609613 938 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 MIR6817-201ENST00000615588 66 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 AL158801.5-201ENST00000623123 465 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 AC092608.2-201ENST00000624427 218 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
NEDD4P46934 AL136360.1-201ENST00000503377 1900 ntBASIC3.02□□□□□ -1.93
NEDD4P46934 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
NEDD4P46934 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.02□□□□□ -1.93
NEDD4P46934 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
NEDD4P46934 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.02□□□□□ -1.93
NEDD4P46934 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
NEDD4P46934 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.01□□□□□ -1.93
NEDD4P46934 AC005832.2-201ENST00000538921 1430 ntBASIC3.01□□□□□ -1.93
NEDD4P46934 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms