Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL591623.2-201ENST00000449978 222 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.650-201ENST00000459002 102 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AC022034.3-201ENST00000471393 478 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AC010409.1-201ENST00000487382 476 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 HMGB1P21-201ENST00000502313 581 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 CYCTP-201ENST00000504253 315 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA4P43681 OR7H2P-201ENST00000513483 306 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 RNU6-1333P-201ENST00000516162 93 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.679-201ENST00000516416 91 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.777-201ENST00000516982 102 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AC087369.1-201ENST00000520775 996 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.96□□□□□ -1.62
CHRNA4P43681 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.96□□□□□ -1.62
CHRNA4P43681 HMGN2P6-201ENST00000551091 273 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.771-201ENST00000598668 102 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AL161637.1-201ENST00000622380 412 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 Y_RNA.789-201ENST00000622480 102 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 AP002799.1-201ENST00000623552 423 ntBASIC4.96□□□□□ -1.62
CHRNA4P43681 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA4P43681 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA4P43681 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.96□□□□□ -1.62
CHRNA4P43681 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA4P43681 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CHRNA4P43681 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA4P43681 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
CHRNA4P43681 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA4P43681 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.95□□□□□ -1.62
CHRNA4P43681 AC097461.1-201ENST00000568928 2821 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA4P43681 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA4P43681 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA4P43681 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
CHRNA4P43681 RN7SKP104-201ENST00000362605 328 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 RNA5SP305-201ENST00000362665 119 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 RNA5SP123-201ENST00000363244 119 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 Y_RNA.218-201ENST00000364218 104 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 Y_RNA.275-201ENST00000364726 110 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 RNU6-937P-201ENST00000384325 106 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 RNU6-933P-201ENST00000384424 107 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 RPL21P75-201ENST00000396599 483 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 RPL21P28-201ENST00000401418 483 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 AL109941.1-201ENST00000401925 229 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 AL590556.1-201ENST00000423231 483 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.95□□□□□ -1.62
CHRNA4P43681 PTMAP6-201ENST00000439110 327 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 RPL21P11-201ENST00000461458 483 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 RPL21P39-201ENST00000463605 483 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 RPL7AP6-201ENST00000477943 801 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 AC132942.1-201ENST00000486753 483 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 AC093591.1-201ENST00000491435 481 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 RPL21P16-201ENST00000495531 483 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 AC140172.1-201ENST00000502928 141 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.95□□□□□ -1.62
CHRNA4P43681 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.95□□□□□ -1.62
CHRNA4P43681 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.95□□□□□ -1.62
CHRNA4P43681 H3F3AP1-201ENST00000559984 334 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 MIR4308-201ENST00000580634 81 ntBASIC4.95□□□□□ -1.62
CHRNA4P43681 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.95□□□□□ -1.62
CHRNA4P43681 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA4P43681 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.95□□□□□ -1.62
CHRNA4P43681 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA4P43681 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA4P43681 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHRNA4P43681 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.95□□□□□ -1.62
CHRNA4P43681 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.95□□□□□ -1.62
CHRNA4P43681 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHRNA4P43681 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA4P43681 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CHRNA4P43681 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.94□□□□□ -1.62
CHRNA4P43681 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA4P43681 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
CHRNA4P43681 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA4P43681 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CHRNA4P43681 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHRNA4P43681 RNU6-834P-201ENST00000362367 110 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 SNORD116-14-201ENST00000383894 92 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 SNORD116-17-201ENST00000383929 92 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 SNORD116-15-201ENST00000384445 92 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 SNORD116-20-201ENST00000384529 92 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 SNORD116-19-201ENST00000384729 92 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHRNA4P43681 Y_RNA.625-201ENST00000411256 107 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 RNU6-516P-201ENST00000411381 104 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 AL358176.3-201ENST00000420757 454 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.94□□□□□ -1.62
CHRNA4P43681 RPL23AP56-201ENST00000460778 453 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 RN7SL97P-201ENST00000486780 299 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 AC004453.1-201ENST00000487895 408 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 NDUFB5P1-201ENST00000508134 564 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 AC093840.1-201ENST00000511599 336 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 ENPP7P9-201ENST00000514456 627 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 AC025755.1-201ENST00000521306 278 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHRNA4P43681 TRAV32-201ENST00000553993 340 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.94□□□□□ -1.62
CHRNA4P43681 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.94□□□□□ -1.62
CHRNA4P43681 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.94□□□□□ -1.62
CHRNA4P43681 OR1M4P-201ENST00000589199 287 ntBASIC4.94□□□□□ -1.62
CHRNA4P43681 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms