Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
RFC5P40937 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.65□□□□□ -1.51
RFC5P40937 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
RFC5P40937 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC5P40937 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RFC5P40937 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RFC5P40937 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.64□□□□□ -1.51
RFC5P40937 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC5P40937 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC5P40937 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RFC5P40937 Y_RNA.84-201ENST00000363011 104 ntBASIC5.64□□□□□ -1.51
RFC5P40937 SNORD27-201ENST00000363981 72 ntBASIC5.64□□□□□ -1.51
RFC5P40937 SNORA2.3-201ENST00000383920 135 ntBASIC5.64□□□□□ -1.51
RFC5P40937 Y_RNA.458-201ENST00000384240 102 ntBASIC5.64□□□□□ -1.51
RFC5P40937 Y_RNA.785-201ENST00000384290 109 ntBASIC5.64□□□□□ -1.51
RFC5P40937 RPL27AP8-201ENST00000424277 446 ntBASIC5.64□□□□□ -1.51
RFC5P40937 SDAD1P3-201ENST00000427380 333 ntBASIC5.64□□□□□ -1.51
RFC5P40937 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC5P40937 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC5P40937 AC231760.1-201ENST00000498002 260 ntBASIC5.64□□□□□ -1.51
RFC5P40937 GZMAP1-201ENST00000503054 631 ntBASIC5.64□□□□□ -1.51
RFC5P40937 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC5P40937 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC5P40937 AC104581.2-201ENST00000572227 430 ntBASIC5.64□□□□□ -1.51
RFC5P40937 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.64□□□□□ -1.51
RFC5P40937 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.64□□□□□ -1.51
RFC5P40937 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.64□□□□□ -1.51
RFC5P40937 AC091905.4-201ENST00000623432 202 ntBASIC5.64□□□□□ -1.51
RFC5P40937 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
RFC5P40937 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RFC5P40937 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC5P40937 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RFC5P40937 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.64□□□□□ -1.51
RFC5P40937 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.64□□□□□ -1.51
RFC5P40937 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.64□□□□□ -1.51
RFC5P40937 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
RFC5P40937 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC5P40937 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RFC5P40937 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RFC5P40937 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RFC5P40937 INTS6P1-201ENST00000504674 2530 ntBASIC5.64□□□□□ -1.51
RFC5P40937 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
RFC5P40937 SMG1P4-204ENST00000523028 4131 ntBASIC5.63□□□□□ -1.51
RFC5P40937 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC5P40937 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
RFC5P40937 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.63□□□□□ -1.51
RFC5P40937 AL391987.6-201ENST00000305671 199 ntBASIC5.63□□□□□ -1.51
RFC5P40937 RNA5SP428-201ENST00000365129 132 ntBASIC5.63□□□□□ -1.51
RFC5P40937 RNU5E-7P-201ENST00000365290 117 ntBASIC5.63□□□□□ -1.51
RFC5P40937 Y_RNA.439-201ENST00000384119 94 ntBASIC5.63□□□□□ -1.51
RFC5P40937 SNORA12.2-201ENST00000391040 156 ntBASIC5.63□□□□□ -1.51
RFC5P40937 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC5P40937 SNORA11B-201ENST00000408175 129 ntBASIC5.63□□□□□ -1.51
RFC5P40937 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RFC5P40937 AL591043.1-201ENST00000432461 424 ntBASIC5.63□□□□□ -1.51
RFC5P40937 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.63□□□□□ -1.51
RFC5P40937 AL078601.1-201ENST00000444542 271 ntBASIC5.63□□□□□ -1.51
RFC5P40937 HIGD1AP2-201ENST00000446367 280 ntBASIC5.63□□□□□ -1.51
RFC5P40937 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC5P40937 ANP32BP2-201ENST00000454525 545 ntBASIC5.63□□□□□ -1.51
RFC5P40937 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC5P40937 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RFC5P40937 RNU7-175P-201ENST00000515915 61 ntBASIC5.63□□□□□ -1.51
RFC5P40937 RNU6-513P-201ENST00000516104 104 ntBASIC5.63□□□□□ -1.51
RFC5P40937 RNA5SP43-201ENST00000516559 110 ntBASIC5.63□□□□□ -1.51
RFC5P40937 Y_RNA.706-201ENST00000516933 99 ntBASIC5.63□□□□□ -1.51
RFC5P40937 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC5P40937 AC093023.1-201ENST00000547375 507 ntBASIC5.63□□□□□ -1.51
RFC5P40937 AC004024.1-201ENST00000549244 247 ntBASIC5.63□□□□□ -1.51
RFC5P40937 EDDM3DP-201ENST00000554692 434 ntBASIC5.63□□□□□ -1.51
RFC5P40937 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.63□□□□□ -1.51
RFC5P40937 AC005046.1-201ENST00000608515 625 ntBASIC5.63□□□□□ -1.51
RFC5P40937 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.63□□□□□ -1.51
RFC5P40937 AP001282.2-201ENST00000616149 309 ntBASIC5.63□□□□□ -1.51
RFC5P40937 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.63□□□□□ -1.51
RFC5P40937 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
RFC5P40937 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
RFC5P40937 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.63□□□□□ -1.51
RFC5P40937 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC5P40937 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC5P40937 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC5P40937 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC5P40937 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC5P40937 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RFC5P40937 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC5P40937 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RFC5P40937 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC5P40937 RN7SKP104-201ENST00000362605 328 ntBASIC5.62□□□□□ -1.51
RFC5P40937 RNA5SP123-201ENST00000363244 119 ntBASIC5.62□□□□□ -1.51
RFC5P40937 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RFC5P40937 RNU6-166P-201ENST00000384371 107 ntBASIC5.62□□□□□ -1.51
RFC5P40937 MIR550A3-201ENST00000390735 95 ntBASIC5.62□□□□□ -1.51
RFC5P40937 AL133270.1-201ENST00000402635 279 ntBASIC5.62□□□□□ -1.51
RFC5P40937 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.62□□□□□ -1.51
RFC5P40937 COX6CP13-201ENST00000428703 226 ntBASIC5.62□□□□□ -1.51
RFC5P40937 BX323845.1-201ENST00000432417 179 ntBASIC5.62□□□□□ -1.51
RFC5P40937 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.62□□□□□ -1.51
RFC5P40937 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.62□□□□□ -1.51
RFC5P40937 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.62□□□□□ -1.51
RFC5P40937 snoU13.24-201ENST00000458998 104 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms