Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 Z73417.1-201ENST00000447373 778 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN4AP35499 MTND2P39-201ENST00000457230 764 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 AC090255.1-201ENST00000495779 349 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 RNA5SP480-201ENST00000516840 109 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 RNU6-1261P-201ENST00000517194 104 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 DEFB131D-201ENST00000526803 184 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN4AP35499 HIGD1AP17-201ENST00000554576 276 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 SNORA4-201ENST00000584302 138 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 AC069545.1-201ENST00000605671 358 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 AC009318.4-201ENST00000620496 486 ntBASIC2.22□□□□□ -2.05
SCN4AP35499 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SCN4AP35499 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCN4AP35499 RNU6-392P-201ENST00000364926 101 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AL590084.1-201ENST00000407885 387 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 RNU2-15P-201ENST00000410692 191 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AC004965.1-201ENST00000413033 213 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.21□□□□□ -2.05
SCN4AP35499 HMGB1P27-201ENST00000431429 603 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 MTND2P5-201ENST00000432656 1006 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AL031313.1-201ENST00000448435 256 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 MTND2P19-201ENST00000449129 1012 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AC108734.3-201ENST00000481241 1165 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.05
SCN4AP35499 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.21□□□□□ -2.05
SCN4AP35499 AC113420.1-201ENST00000507903 571 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AC008837.2-201ENST00000513076 418 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.21□□□□□ -2.05
SCN4AP35499 OR10V3P-201ENST00000525712 725 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
SCN4AP35499 SULT1C2P1-202ENST00000562418 459 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 SNRPGP19-201ENST00000603826 189 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AC021749.1-201ENST00000604322 607 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AC006023.2-201ENST00000609916 167 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.21□□□□□ -2.05
SCN4AP35499 ZNF663P-202ENST00000641770 1131 ntBASIC2.21□□□□□ -2.05
SCN4AP35499 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.05
SCN4AP35499 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN4AP35499 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
SCN4AP35499 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SCN4AP35499 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
SCN4AP35499 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SCN4AP35499 SNORD82-201ENST00000365530 70 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 AP000567.1-201ENST00000406413 156 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 AL023807.1-201ENST00000407932 359 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 RNU6-575P-201ENST00000411326 105 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN4AP35499 AL449283.1-202ENST00000418249 604 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.21□□□□□ -2.06
SCN4AP35499 MTCYBP45-201ENST00000435243 565 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 USP9YP22-201ENST00000438971 294 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN4AP35499 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN4AP35499 RPS24P6-201ENST00000452670 400 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN4AP35499 RPL18AP17-201ENST00000455326 198 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.21□□□□□ -2.06
SCN4AP35499 AC079203.1-201ENST00000487972 404 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 MTAPP1-201ENST00000489154 819 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN4AP35499 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.21□□□□□ -2.06
SCN4AP35499 AL136370.1-201ENST00000608166 691 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 AC004009.2-201ENST00000623016 728 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 AC006963.1-201ENST00000624003 1052 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN4AP35499 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN4AP35499 GDI2P1-201ENST00000429312 1336 ntBASIC2.21□□□□□ -2.06
SCN4AP35499 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCN4AP35499 SET-203ENST00000372688 801 ntTSL 2 BASIC2.2□□□□□ -2.06
SCN4AP35499 Y_RNA.408-201ENST00000383987 102 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SCN4AP35499 RNU6-837P-201ENST00000391056 108 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AC092447.6-201ENST00000414578 210 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 RPS3AP37-201ENST00000419176 745 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN4AP35499 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.2□□□□□ -2.06
SCN4AP35499 WARS2P1-201ENST00000429678 537 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.2□□□□□ -2.06
SCN4AP35499 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN4AP35499 AC007327.1-201ENST00000447461 264 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 RPL23AP55-201ENST00000498163 452 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AC026414.1-201ENST00000504046 698 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 TPT1P8-201ENST00000510120 555 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 RNU1-61P-201ENST00000516107 151 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN4AP35499 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN4AP35499 AC008127.2-201ENST00000549925 1075 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN4AP35499 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN4AP35499 MIR5694-201ENST00000581190 76 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AP001029.3-201ENST00000588063 596 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AC069431.2-201ENST00000604149 1099 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 DPRXP5-201ENST00000604662 539 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AC080013.4-201ENST00000607624 649 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AL121652.1-201ENST00000608851 448 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 AC018755.4-201ENST00000619715 454 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.2□□□□□ -2.06
SCN4AP35499 LINC02211-204ENST00000642024 1070 ntBASIC2.2□□□□□ -2.06
SCN4AP35499 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms