Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.45□□□□□ -2.02
RORAP35398 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.45□□□□□ -2.02
RORAP35398 AL158801.5-201ENST00000623123 465 ntBASIC2.45□□□□□ -2.02
RORAP35398 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.45□□□□□ -2.02
RORAP35398 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RORAP35398 AL049641.1-201ENST00000441055 1948 ntBASIC2.44□□□□□ -2.02
RORAP35398 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RORAP35398 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
RORAP35398 AC004944.1-201ENST00000517807 3059 ntBASIC2.44□□□□□ -2.02
RORAP35398 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RORAP35398 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RORAP35398 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RORAP35398 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.44□□□□□ -2.02
RORAP35398 SNORA68.1-201ENST00000364537 132 ntBASIC2.44□□□□□ -2.02
RORAP35398 SNORA67.1-201ENST00000364749 141 ntBASIC2.44□□□□□ -2.02
RORAP35398 RNU1-39P-201ENST00000383897 165 ntBASIC2.44□□□□□ -2.02
RORAP35398 RNU6-906P-201ENST00000384700 70 ntBASIC2.44□□□□□ -2.02
RORAP35398 RNU6-114P-201ENST00000384704 105 ntBASIC2.44□□□□□ -2.02
RORAP35398 AL356421.1-201ENST00000403255 413 ntBASIC2.44□□□□□ -2.02
RORAP35398 RPS4XP7-201ENST00000406274 780 ntBASIC2.44□□□□□ -2.02
RORAP35398 AL513475.1-201ENST00000406602 315 ntBASIC2.44□□□□□ -2.02
RORAP35398 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.44□□□□□ -2.02
RORAP35398 USP9YP33-201ENST00000412220 421 ntBASIC2.44□□□□□ -2.02
RORAP35398 AC080125.1-201ENST00000414888 684 ntBASIC2.44□□□□□ -2.02
RORAP35398 Z85995.1-201ENST00000415547 335 ntBASIC2.44□□□□□ -2.02
RORAP35398 AC009963.1-201ENST00000417265 157 ntBASIC2.44□□□□□ -2.02
RORAP35398 AL035407.1-201ENST00000429211 571 ntBASIC2.44□□□□□ -2.02
RORAP35398 TXNL1P1-201ENST00000429528 554 ntBASIC2.44□□□□□ -2.02
RORAP35398 USP9YP35-201ENST00000435696 412 ntBASIC2.44□□□□□ -2.02
RORAP35398 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.44□□□□□ -2.02
RORAP35398 SNRPEP7-201ENST00000438350 220 ntBASIC2.44□□□□□ -2.02
RORAP35398 MTCO1P27-201ENST00000448269 226 ntBASIC2.44□□□□□ -2.02
RORAP35398 USP9YP10-201ENST00000454868 628 ntBASIC2.44□□□□□ -2.02
RORAP35398 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.44□□□□□ -2.02
RORAP35398 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.44□□□□□ -2.02
RORAP35398 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.44□□□□□ -2.02
RORAP35398 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.44□□□□□ -2.02
RORAP35398 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.44□□□□□ -2.02
RORAP35398 RNU6-840P-201ENST00000517275 65 ntBASIC2.44□□□□□ -2.02
RORAP35398 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.44□□□□□ -2.02
RORAP35398 AP001646.1-201ENST00000527936 915 ntBASIC2.44□□□□□ -2.02
RORAP35398 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.44□□□□□ -2.02
RORAP35398 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.44□□□□□ -2.02
RORAP35398 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.44□□□□□ -2.02
RORAP35398 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.44□□□□□ -2.02
RORAP35398 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.44□□□□□ -2.02
RORAP35398 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.44□□□□□ -2.02
RORAP35398 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.44□□□□□ -2.02
RORAP35398 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.44□□□□□ -2.02
RORAP35398 MIR3945-201ENST00000581853 98 ntBASIC2.44□□□□□ -2.02
RORAP35398 MIR3616-201ENST00000584070 92 ntBASIC2.44□□□□□ -2.02
RORAP35398 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
RORAP35398 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.44□□□□□ -2.02
RORAP35398 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.44□□□□□ -2.02
RORAP35398 AC090186.1-201ENST00000605991 572 ntBASIC2.44□□□□□ -2.02
RORAP35398 AC009974.1-201ENST00000608881 455 ntBASIC2.44□□□□□ -2.02
RORAP35398 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RORAP35398 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RORAP35398 AC007785.2-201ENST00000598627 1916 ntBASIC2.44□□□□□ -2.02
RORAP35398 AC092447.10-201ENST00000620607 1652 ntBASIC2.44□□□□□ -2.02
RORAP35398 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RORAP35398 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
RORAP35398 RNU6-636P-201ENST00000384598 107 ntBASIC2.43□□□□□ -2.02
RORAP35398 RNU6-925P-201ENST00000384629 104 ntBASIC2.43□□□□□ -2.02
RORAP35398 MIR27B-201ENST00000385129 97 ntBASIC2.43□□□□□ -2.02
RORAP35398 U3.20-201ENST00000390909 217 ntBASIC2.43□□□□□ -2.02
RORAP35398 AC007064.1-201ENST00000412238 351 ntBASIC2.43□□□□□ -2.02
RORAP35398 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.43□□□□□ -2.02
RORAP35398 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.43□□□□□ -2.02
RORAP35398 AC099548.1-201ENST00000421443 426 ntBASIC2.43□□□□□ -2.02
RORAP35398 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.43□□□□□ -2.02
RORAP35398 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.43□□□□□ -2.02
RORAP35398 USP9YP24-201ENST00000434374 697 ntBASIC2.43□□□□□ -2.02
RORAP35398 AL117351.1-201ENST00000438864 766 ntBASIC2.43□□□□□ -2.02
RORAP35398 RPL32P28-201ENST00000443577 397 ntBASIC2.43□□□□□ -2.02
RORAP35398 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.43□□□□□ -2.02
RORAP35398 USP9YP17-201ENST00000444617 696 ntBASIC2.43□□□□□ -2.02
RORAP35398 AC104389.3-201ENST00000445629 235 ntBASIC2.43□□□□□ -2.02
RORAP35398 MRPL50P4-201ENST00000446432 475 ntBASIC2.43□□□□□ -2.02
RORAP35398 PTENP1-201ENST00000447117 1215 ntBASIC2.43□□□□□ -2.02
RORAP35398 ST13P20-201ENST00000447996 1065 ntBASIC2.43□□□□□ -2.02
RORAP35398 DPPA3P1-201ENST00000448050 469 ntBASIC2.43□□□□□ -2.02
RORAP35398 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.43□□□□□ -2.02
RORAP35398 MTND1P9-201ENST00000453775 944 ntBASIC2.43□□□□□ -2.02
RORAP35398 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.43□□□□□ -2.02
RORAP35398 AC022447.3-201ENST00000506865 495 ntBASIC2.43□□□□□ -2.02
RORAP35398 RNA5SP320-201ENST00000516263 124 ntBASIC2.43□□□□□ -2.02
RORAP35398 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.43□□□□□ -2.02
RORAP35398 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.43□□□□□ -2.02
RORAP35398 RPL7P20-201ENST00000520308 745 ntBASIC2.43□□□□□ -2.02
RORAP35398 AC100870.1-201ENST00000522035 505 ntBASIC2.43□□□□□ -2.02
RORAP35398 SUB1P1-201ENST00000524415 382 ntBASIC2.43□□□□□ -2.02
RORAP35398 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.43□□□□□ -2.02
RORAP35398 AP002748.2-201ENST00000528671 348 ntBASIC2.43□□□□□ -2.02
RORAP35398 AC027176.1-201ENST00000560204 514 ntBASIC2.43□□□□□ -2.02
RORAP35398 RPL23AP84-201ENST00000571193 464 ntBASIC2.43□□□□□ -2.02
RORAP35398 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.43□□□□□ -2.02
RORAP35398 AC022662.1-201ENST00000580252 331 ntBASIC2.43□□□□□ -2.02
RORAP35398 RPP40P2-201ENST00000603596 712 ntBASIC2.43□□□□□ -2.02
RORAP35398 AC092953.2-201ENST00000608000 699 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms