Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC12P31275 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXC12P31275 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXC12P31275 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC12P31275 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXC12P31275 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXC12P31275 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC12P31275 SNORD5.1-201ENST00000458800 75 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 RNU7-187P-201ENST00000458985 68 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 HMGB1P30-201ENST00000492455 606 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC12P31275 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
HOXC12P31275 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC12P31275 SNORA31.8-201ENST00000516327 108 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 RNU6-1137P-201ENST00000517073 99 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 Y_RNA.720-201ENST00000517166 92 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 RN7SKP92-201ENST00000517266 244 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.31□□□□□ -1.72
HOXC12P31275 AC009902.1-201ENST00000519351 183 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC12P31275 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.31□□□□□ -1.72
HOXC12P31275 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXC12P31275 AC040958.1-201ENST00000561102 201 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 AC084783.1-201ENST00000565846 910 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 SNORA74C-1-201ENST00000580726 201 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXC12P31275 BNIP3P16-201ENST00000589779 534 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 AL590392.1-201ENST00000604960 446 ntBASIC4.31□□□□□ -1.72
HOXC12P31275 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
HOXC12P31275 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXC12P31275 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXC12P31275 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HOXC12P31275 AL136164.3-201ENST00000624429 3978 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC12P31275 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC12P31275 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC12P31275 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 SCN1A-220ENST00000641603 12506 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 Y_RNA.33-201ENST00000362591 102 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 Y_RNA.151-201ENST00000363566 112 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC12P31275 Y_RNA.463-201ENST00000384271 102 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 RNU2-3P-201ENST00000410144 191 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 RN7SKP27-201ENST00000410684 333 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 RN7SKP100-201ENST00000411258 284 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 AC114755.2-201ENST00000413520 361 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXC12P31275 AC018865.2-201ENST00000423631 129 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 AL356867.1-201ENST00000429623 299 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXC12P31275 RPL23AP50-201ENST00000434149 455 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXC12P31275 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.3□□□□□ -1.72
HOXC12P31275 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXC12P31275 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXC12P31275 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXC12P31275 MTND5P22-201ENST00000458380 195 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXC12P31275 AC021146.2-201ENST00000504736 556 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXC12P31275 RNU6-470P-201ENST00000515954 104 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 RNA5SP309-201ENST00000516670 106 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 RNU6-1073P-201ENST00000517182 106 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXC12P31275 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXC12P31275 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXC12P31275 AC011494.1-201ENST00000596454 237 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 AL078596.1-201ENST00000624856 447 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 AC005183.1-201ENST00000603687 1979 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC12P31275 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HOXC12P31275 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC12P31275 MARK2P15-201ENST00000432204 2186 ntBASIC4.3□□□□□ -1.72
HOXC12P31275 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXC12P31275 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
HOXC12P31275 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HOXC12P31275 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXC12P31275 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC12P31275 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXC12P31275 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HOXC12P31275 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXC12P31275 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXC12P31275 MAPK10-303ENST00000641324 3959 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 Y_RNA.144-201ENST00000363521 113 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 RNU6-1059P-201ENST00000363752 98 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 RNU6-395P-201ENST00000365662 106 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 AC117470.1-201ENST00000381974 330 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 AL445529.1-201ENST00000398713 389 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 MIR298-201ENST00000401212 88 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 AL356057.3-201ENST00000402607 340 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 RNU6-1025P-201ENST00000410629 104 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 MCFD2P1-201ENST00000417812 300 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 RPL17P36-201ENST00000420302 549 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 AL158156.1-201ENST00000422509 473 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 RPL27AP8-201ENST00000424277 446 ntBASIC4.29□□□□□ -1.72
HOXC12P31275 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXC12P31275 AC007919.1-201ENST00000429380 217 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms