Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 USP9YP28-201ENST00000435142 589 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA13P31271 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA13P31271 MTCO3P45-201ENST00000443036 613 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA13P31271 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXA13P31271 ST13P20-201ENST00000447996 1065 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 AC006539.3-201ENST00000454258 129 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 RNA5SP310-201ENST00000459084 116 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 AC096576.1-201ENST00000489014 359 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA13P31271 RNU1-103P-201ENST00000516502 125 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 AP002963.1-201ENST00000530590 184 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA13P31271 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXA13P31271 AC137800.2-201ENST00000574375 120 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 MIR3146-201ENST00000580367 79 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 AC068790.6-201ENST00000602558 258 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA13P31271 AC245517.5-201ENST00000611529 162 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 AC010133.1-201ENST00000615809 842 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA13P31271 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA13P31271 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXA13P31271 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HOXA13P31271 AC008568.2-201ENST00000623862 2313 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXA13P31271 AC000403.1-201ENST00000613696 3585 ntBASIC3.43□□□□□ -1.86
HOXA13P31271 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA13P31271 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA13P31271 SRP72P2-201ENST00000344851 1979 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AC004972.1-201ENST00000623934 2209 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA13P31271 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
HOXA13P31271 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA13P31271 FGF7P2-201ENST00000332473 296 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 SNORA80A-201ENST00000363922 136 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 RNY3P13-201ENST00000365542 102 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 SNORA36C-201ENST00000384289 132 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 MIR514A1-201ENST00000385133 98 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
HOXA13P31271 FAT1P1-201ENST00000406588 507 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 EEF1A1P41-201ENST00000414667 207 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 RPL32P35-201ENST00000415214 394 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA13P31271 TMEM167AP1-201ENST00000423409 219 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA13P31271 AC119618.1-201ENST00000434191 222 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AC092573.2-201ENST00000434546 243 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 SSXP4-201ENST00000451349 245 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AL136097.1-201ENST00000456945 913 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA13P31271 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA13P31271 RNU6-64P-201ENST00000517119 105 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AC022690.1-201ENST00000526681 550 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA13P31271 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA13P31271 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXA13P31271 AC005951.2-201ENST00000576282 495 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA13P31271 SEPT7P9-203ENST00000604116 343 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AC008962.1-201ENST00000605729 304 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AL021997.1-201ENST00000605757 193 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 RNU6-87P-201ENST00000607561 108 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AC098614.4-201ENST00000607601 462 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXA13P31271 SDR42E1P2-201ENST00000614861 481 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AC006338.1-201ENST00000618453 749 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 PLCE1P1-201ENST00000622094 305 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 AC092628.2-201ENST00000622492 339 ntBASIC3.42□□□□□ -1.86
HOXA13P31271 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA13P31271 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXA13P31271 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
HOXA13P31271 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AL136164.4-201ENST00000625013 2135 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AC002546.1-201ENST00000588041 2504 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXA13P31271 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXA13P31271 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
HOXA13P31271 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.41□□□□□ -1.86
HOXA13P31271 RNU6-348P-201ENST00000384386 107 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 U3.42-201ENST00000408746 214 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 RNU2-62P-201ENST00000410868 191 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 Y_RNA.619-201ENST00000410951 90 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 MTCO3P41-201ENST00000414801 328 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 CDK8P2-201ENST00000415020 547 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXA13P31271 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXA13P31271 AL590383.1-201ENST00000428602 75 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXA13P31271 AL139132.1-201ENST00000431587 344 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.41□□□□□ -1.86
HOXA13P31271 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.41□□□□□ -1.86
HOXA13P31271 RNA5SP269-201ENST00000459032 137 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 AC010631.1-201ENST00000474150 156 ntBASIC3.41□□□□□ -1.86
HOXA13P31271 MTND1P3-201ENST00000484956 952 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms