Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC244517.12-201ENST00000623581 663 ntBASIC3.94□□□□□ -1.78
CD40P25942 AL669831.3-213ENST00000636676 183 ntBASIC3.94□□□□□ -1.78
CD40P25942 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.94□□□□□ -1.78
CD40P25942 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.94□□□□□ -1.78
CD40P25942 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD40P25942 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD40P25942 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CD40P25942 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CD40P25942 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.94□□□□□ -1.78
CD40P25942 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
CD40P25942 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CD40P25942 AC000123.3-201ENST00000624029 4975 ntBASIC3.93□□□□□ -1.78
CD40P25942 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 SCN1A-220ENST00000641603 12506 ntBASIC3.93□□□□□ -1.78
CD40P25942 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 Y_RNA.187-201ENST00000363918 113 ntBASIC3.93□□□□□ -1.78
CD40P25942 RNU6-384P-201ENST00000364900 104 ntBASIC3.93□□□□□ -1.78
CD40P25942 RNU6-1329P-201ENST00000365664 107 ntBASIC3.93□□□□□ -1.78
CD40P25942 Y_RNA.473-201ENST00000384333 102 ntBASIC3.93□□□□□ -1.78
CD40P25942 RNU6-310P-201ENST00000384655 107 ntBASIC3.93□□□□□ -1.78
CD40P25942 RNU2-68P-201ENST00000410878 191 ntBASIC3.93□□□□□ -1.78
CD40P25942 ATG3P1-201ENST00000419507 911 ntBASIC3.93□□□□□ -1.78
CD40P25942 YPEL5P1-201ENST00000419731 367 ntBASIC3.93□□□□□ -1.78
CD40P25942 RPS15AP6-201ENST00000420703 385 ntBASIC3.93□□□□□ -1.78
CD40P25942 AL356387.2-201ENST00000422272 243 ntBASIC3.93□□□□□ -1.78
CD40P25942 UBE2D3P2-201ENST00000424409 445 ntBASIC3.93□□□□□ -1.78
CD40P25942 UBE2V1P4-201ENST00000425374 344 ntBASIC3.93□□□□□ -1.78
CD40P25942 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.93□□□□□ -1.78
CD40P25942 HIGD1AP11-201ENST00000438361 280 ntBASIC3.93□□□□□ -1.78
CD40P25942 AC073587.1-201ENST00000447093 876 ntBASIC3.93□□□□□ -1.78
CD40P25942 DHFRP3-201ENST00000455595 559 ntBASIC3.93□□□□□ -1.78
CD40P25942 AL583843.1-201ENST00000456070 346 ntBASIC3.93□□□□□ -1.78
CD40P25942 RPS23P7-201ENST00000466210 444 ntBASIC3.93□□□□□ -1.78
CD40P25942 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.93□□□□□ -1.78
CD40P25942 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.93□□□□□ -1.78
CD40P25942 MTCYBP40-201ENST00000509390 1135 ntBASIC3.93□□□□□ -1.78
CD40P25942 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.93□□□□□ -1.78
CD40P25942 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.93□□□□□ -1.78
CD40P25942 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.93□□□□□ -1.78
CD40P25942 MIR3171-201ENST00000584270 74 ntBASIC3.93□□□□□ -1.78
CD40P25942 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CD40P25942 AC136601.2-201ENST00000604356 474 ntBASIC3.93□□□□□ -1.78
CD40P25942 AC123912.5-201ENST00000605470 343 ntBASIC3.93□□□□□ -1.78
CD40P25942 AL157817.1-201ENST00000614264 790 ntBASIC3.93□□□□□ -1.78
CD40P25942 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.93□□□□□ -1.78
CD40P25942 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.93□□□□□ -1.78
CD40P25942 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.93□□□□□ -1.78
CD40P25942 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.93□□□□□ -1.78
CD40P25942 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CD40P25942 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CD40P25942 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
CD40P25942 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CD40P25942 SNORD62.1-201ENST00000362541 86 ntBASIC3.92□□□□□ -1.78
CD40P25942 Y_RNA.162-201ENST00000363683 102 ntBASIC3.92□□□□□ -1.78
CD40P25942 Y_RNA.445-201ENST00000384168 102 ntBASIC3.92□□□□□ -1.78
CD40P25942 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CD40P25942 SNORA75.4-201ENST00000391278 119 ntBASIC3.92□□□□□ -1.78
CD40P25942 PPIAP31-201ENST00000405422 495 ntBASIC3.92□□□□□ -1.78
CD40P25942 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.92□□□□□ -1.78
CD40P25942 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.92□□□□□ -1.78
CD40P25942 RPL31P12-201ENST00000422587 358 ntBASIC3.92□□□□□ -1.78
CD40P25942 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.92□□□□□ -1.78
CD40P25942 AL512844.2-201ENST00000433990 593 ntBASIC3.92□□□□□ -1.78
CD40P25942 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.92□□□□□ -1.78
CD40P25942 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.92□□□□□ -1.78
CD40P25942 ELOCP24-201ENST00000456370 334 ntBASIC3.92□□□□□ -1.78
CD40P25942 Y_RNA.631-201ENST00000459607 101 ntBASIC3.92□□□□□ -1.78
CD40P25942 RN7SL385P-201ENST00000468873 276 ntBASIC3.92□□□□□ -1.78
CD40P25942 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.92□□□□□ -1.78
CD40P25942 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC3.92□□□□□ -1.78
CD40P25942 AC021146.3-201ENST00000511911 260 ntBASIC3.92□□□□□ -1.78
CD40P25942 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.92□□□□□ -1.78
CD40P25942 IGLVIV-65-201ENST00000517313 360 ntBASIC3.92□□□□□ -1.78
CD40P25942 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.92□□□□□ -1.78
CD40P25942 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.92□□□□□ -1.78
CD40P25942 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.92□□□□□ -1.78
CD40P25942 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.92□□□□□ -1.78
CD40P25942 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.92□□□□□ -1.78
CD40P25942 MIR4697-201ENST00000582977 78 ntBASIC3.92□□□□□ -1.78
CD40P25942 PART1_1.1-201ENST00000611761 217 ntBASIC3.92□□□□□ -1.78
CD40P25942 AL161423.1-201ENST00000613700 262 ntBASIC3.92□□□□□ -1.78
CD40P25942 AC098657.3-201ENST00000620434 263 ntBASIC3.92□□□□□ -1.78
CD40P25942 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
CD40P25942 AP001642.1-201ENST00000624727 2117 ntBASIC3.92□□□□□ -1.78
CD40P25942 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.92□□□□□ -1.78
CD40P25942 MAPK10-286ENST00000641208 8747 ntBASIC3.91□□□□□ -1.78
CD40P25942 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD40P25942 EOGT-210ENST00000615922 1931 ntBASIC3.91□□□□□ -1.78
CD40P25942 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.91□□□□□ -1.78
CD40P25942 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CD40P25942 AC010733.2-201ENST00000589496 5702 ntBASIC3.91□□□□□ -1.78
CD40P25942 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms