Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SNORA26.7-201ENST00000391288 122 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 NDUFS5P4-201ENST00000412983 318 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 HMGB1P11-201ENST00000413899 637 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 NDUFB4P5-201ENST00000415445 361 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 BPY2DP-201ENST00000422208 265 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 MED14P1-201ENST00000430517 648 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 RPL7P36-201ENST00000444633 681 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 RPS27AP10-201ENST00000496103 208 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AC117522.3-201ENST00000507974 584 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 SCARNA17.1-201ENST00000516211 143 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 SCARNA17.2-201ENST00000516334 143 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 SCARNA13-201ENST00000516672 275 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AC091965.4-201ENST00000607691 587 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 AC245517.5-201ENST00000611529 162 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 SCARNA17.4-201ENST00000614296 143 ntBASIC2.88□□□□□ -1.95
HLA-DPA1P20036 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DPA1P20036 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 EEF1A1P41-201ENST00000414667 207 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 RPS20P5-201ENST00000434808 360 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AL445687.1-201ENST00000439946 251 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 ANKRD26P4-201ENST00000455755 950 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AC107626.1-201ENST00000471084 183 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 RPL23AP41-201ENST00000484754 458 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 RNA5SP165-201ENST00000517142 115 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AC087276.1-201ENST00000529659 480 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 DEFB108A-201ENST00000530110 222 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 HPRT1P3-201ENST00000539521 576 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 NACAP3-201ENST00000552100 481 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AC061975.8-201ENST00000587058 721 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AC024153.1-201ENST00000603103 365 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AC098826.3-201ENST00000603823 466 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AL031281.1-201ENST00000604049 488 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AC034102.8-201ENST00000615146 484 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AC140725.3-201ENST00000616193 880 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 AL365361.1-201ENST00000566942 3481 ntBASIC2.87□□□□□ -1.95
HLA-DPA1P20036 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
HLA-DPA1P20036 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 RPL9P7-201ENST00000330965 580 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 RNU2-68P-201ENST00000410878 191 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AL008987.1-201ENST00000415528 237 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AL139132.1-201ENST00000431587 344 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 FCF1P1-201ENST00000432690 571 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 UBE2FP3-201ENST00000436366 524 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 YWHAZP7-201ENST00000436906 631 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 LARP1BP3-201ENST00000437229 869 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 RPS29P26-201ENST00000477483 171 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 EIF4EP3-201ENST00000498782 656 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 TPT1P8-201ENST00000510120 555 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 RNA5SP471-201ENST00000516971 106 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 SNORA31.18-201ENST00000517043 134 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AC106782.4-201ENST00000568264 210 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 MIR4293-201ENST00000584305 78 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AP000403.1-201ENST00000603349 851 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AL161798.1-201ENST00000604630 131 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AL355493.4-201ENST00000618530 292 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AP002782.1-201ENST00000623107 614 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AC006386.2-201ENST00000624491 75 ntBASIC2.86□□□□□ -1.95
HLA-DPA1P20036 AC012005.1-201ENST00000624575 75 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms