Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC117503.1-201ENST00000472241 394 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.12□□□□□ -1.59
ERCC3P19447 RNA5SP315-201ENST00000516340 116 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 RNA5SP312-201ENST00000517068 116 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.12□□□□□ -1.59
ERCC3P19447 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.12□□□□□ -1.59
ERCC3P19447 AC015912.2-201ENST00000571053 181 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 MIR1273C-201ENST00000578669 77 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.12□□□□□ -1.59
ERCC3P19447 AC044792.1-201ENST00000593294 196 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 AC073539.2-201ENST00000597113 165 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 APOOP1-201ENST00000604695 592 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 AL591034.3-201ENST00000605511 685 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 uc_338.13-201ENST00000618243 179 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 MTND1P37-201ENST00000636562 264 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
ERCC3P19447 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC3P19447 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC3P19447 MFSD8-242ENST00000641690 4199 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 AC068254.2-201ENST00000623938 3577 ntBASIC5.12□□□□□ -1.59
ERCC3P19447 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
ERCC3P19447 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.12□□□□□ -1.59
ERCC3P19447 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC3P19447 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
ERCC3P19447 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC3P19447 AC008725.1-201ENST00000605123 2263 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.11□□□□□ -1.59
ERCC3P19447 RNU1-64P-201ENST00000365443 163 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 RNU1-13P-201ENST00000384499 162 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 MIR134-201ENST00000385258 73 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 RNA5SP372-201ENST00000390836 115 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 RNU6-1197P-201ENST00000391183 107 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 PPIAP31-201ENST00000405422 495 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC3P19447 RNU2-33P-201ENST00000410344 192 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 RNU6-1304P-201ENST00000411374 106 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 RPL37P10-201ENST00000412884 288 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.11□□□□□ -1.59
ERCC3P19447 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.11□□□□□ -1.59
ERCC3P19447 RANP8-201ENST00000444720 713 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC3P19447 AC012671.1-201ENST00000451912 203 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC3P19447 RPL9P32-201ENST00000464118 620 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 AC087884.1-201ENST00000469738 328 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 RPS23P3-201ENST00000470993 430 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.11□□□□□ -1.59
ERCC3P19447 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC3P19447 CYCSP27-201ENST00000527643 293 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC3P19447 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC3P19447 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.11□□□□□ -1.59
ERCC3P19447 AC025423.5-201ENST00000550230 219 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC3P19447 HSPE1P5-201ENST00000561489 272 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.11□□□□□ -1.59
ERCC3P19447 AC016727.1-205ENST00000605437 569 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.11□□□□□ -1.59
ERCC3P19447 AL050343.2-201ENST00000607338 280 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 AL031601.2-202ENST00000622650 282 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC3P19447 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
ERCC3P19447 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC3P19447 NCAPGP1-201ENST00000505112 1814 ntBASIC5.11□□□□□ -1.59
ERCC3P19447 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
ERCC3P19447 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
ERCC3P19447 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC3P19447 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ERCC3P19447 AC087190.4-201ENST00000574616 8334 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ERCC3P19447 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ERCC3P19447 MIR383-201ENST00000362257 73 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 RNU1-108P-201ENST00000362556 161 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 RNU6-266P-201ENST00000364225 107 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 RNU6-395P-201ENST00000365662 106 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ERCC3P19447 Y_RNA.474-201ENST00000384341 102 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 Y_RNA.480-201ENST00000384364 102 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
ERCC3P19447 AL022722.2-201ENST00000402519 180 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC3P19447 AC073063.1-201ENST00000434352 607 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 RPS3AP52-201ENST00000435639 297 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.1□□□□□ -1.59
ERCC3P19447 AL360271.2-201ENST00000447710 161 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.1□□□□□ -1.59
ERCC3P19447 RPS27P27-201ENST00000498779 255 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ERCC3P19447 RNA5SP454-201ENST00000517231 127 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.1□□□□□ -1.59
ERCC3P19447 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.1□□□□□ -1.59
ERCC3P19447 RPL21P7-201ENST00000557463 483 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 FRG2DP-202ENST00000566967 323 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC3P19447 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.1□□□□□ -1.59
ERCC3P19447 AC007151.1-201ENST00000572774 483 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 AC007785.2-201ENST00000598627 1916 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 MIR6891-201ENST00000618788 93 ntBASIC5.1□□□□□ -1.59
ERCC3P19447 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms