Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC091912.1-201ENST00000511351 248 ntBASIC4.31□□□□□ -1.72
ATF4P18848 RNA5SP249-201ENST00000516127 99 ntBASIC4.31□□□□□ -1.72
ATF4P18848 SNORA70.20-201ENST00000516848 126 ntBASIC4.31□□□□□ -1.72
ATF4P18848 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATF4P18848 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.31□□□□□ -1.72
ATF4P18848 AC107016.1-201ENST00000550463 337 ntBASIC4.31□□□□□ -1.72
ATF4P18848 AC103996.1-201ENST00000555468 102 ntBASIC4.31□□□□□ -1.72
ATF4P18848 AC007225.2-201ENST00000562529 256 ntBASIC4.31□□□□□ -1.72
ATF4P18848 AC096996.1-201ENST00000563813 325 ntBASIC4.31□□□□□ -1.72
ATF4P18848 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.31□□□□□ -1.72
ATF4P18848 AC010547.6-201ENST00000571789 193 ntBASIC4.31□□□□□ -1.72
ATF4P18848 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.31□□□□□ -1.72
ATF4P18848 RNA5SP440-201ENST00000612665 119 ntBASIC4.31□□□□□ -1.72
ATF4P18848 AC022467.1-201ENST00000614738 749 ntBASIC4.31□□□□□ -1.72
ATF4P18848 uc_338.7-201ENST00000621834 124 ntBASIC4.31□□□□□ -1.72
ATF4P18848 U4.7-201ENST00000638126 106 ntBASIC4.31□□□□□ -1.72
ATF4P18848 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.31□□□□□ -1.72
ATF4P18848 AC023421.1-201ENST00000590535 1785 ntBASIC4.31□□□□□ -1.72
ATF4P18848 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ATF4P18848 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.31□□□□□ -1.72
ATF4P18848 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATF4P18848 AF127577.6-201ENST00000623352 2191 ntBASIC4.31□□□□□ -1.72
ATF4P18848 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.31□□□□□ -1.72
ATF4P18848 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATF4P18848 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.31□□□□□ -1.72
ATF4P18848 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
ATF4P18848 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ATF4P18848 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
ATF4P18848 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATF4P18848 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATF4P18848 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATF4P18848 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATF4P18848 Y_RNA.112-201ENST00000363250 102 ntBASIC4.3□□□□□ -1.72
ATF4P18848 RNU6-1059P-201ENST00000363752 98 ntBASIC4.3□□□□□ -1.72
ATF4P18848 RNA5SP513-201ENST00000364648 118 ntBASIC4.3□□□□□ -1.72
ATF4P18848 RNU6-898P-201ENST00000365627 104 ntBASIC4.3□□□□□ -1.72
ATF4P18848 SNORD96B-201ENST00000386148 79 ntBASIC4.3□□□□□ -1.72
ATF4P18848 AC004552.1-201ENST00000419089 348 ntBASIC4.3□□□□□ -1.72
ATF4P18848 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.3□□□□□ -1.72
ATF4P18848 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
ATF4P18848 RN7SL517P-201ENST00000462240 305 ntBASIC4.3□□□□□ -1.72
ATF4P18848 RPS26P3-201ENST00000470205 348 ntBASIC4.3□□□□□ -1.72
ATF4P18848 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.3□□□□□ -1.72
ATF4P18848 RN7SL717P-201ENST00000478343 297 ntBASIC4.3□□□□□ -1.72
ATF4P18848 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.3□□□□□ -1.72
ATF4P18848 AC090543.2-201ENST00000483963 348 ntBASIC4.3□□□□□ -1.72
ATF4P18848 AC004057.1-201ENST00000485827 348 ntBASIC4.3□□□□□ -1.72
ATF4P18848 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.3□□□□□ -1.72
ATF4P18848 RNU6-470P-201ENST00000515954 104 ntBASIC4.3□□□□□ -1.72
ATF4P18848 AC022634.1-201ENST00000520765 532 ntBASIC4.3□□□□□ -1.72
ATF4P18848 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.3□□□□□ -1.72
ATF4P18848 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.3□□□□□ -1.72
ATF4P18848 IGBP1P1-201ENST00000554337 1009 ntBASIC4.3□□□□□ -1.72
ATF4P18848 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.3□□□□□ -1.72
ATF4P18848 CPDP1-201ENST00000579660 283 ntBASIC4.3□□□□□ -1.72
ATF4P18848 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.3□□□□□ -1.72
ATF4P18848 MIR4311-201ENST00000580794 100 ntBASIC4.3□□□□□ -1.72
ATF4P18848 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.3□□□□□ -1.72
ATF4P18848 MIR6729-201ENST00000618194 65 ntBASIC4.3□□□□□ -1.72
ATF4P18848 MIR6886-201ENST00000619864 61 ntBASIC4.3□□□□□ -1.72
ATF4P18848 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.3□□□□□ -1.72
ATF4P18848 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.3□□□□□ -1.72
ATF4P18848 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.3□□□□□ -1.72
ATF4P18848 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATF4P18848 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ATF4P18848 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATF4P18848 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.3□□□□□ -1.72
ATF4P18848 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATF4P18848 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ATF4P18848 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATF4P18848 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.29□□□□□ -1.72
ATF4P18848 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATF4P18848 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.29□□□□□ -1.72
ATF4P18848 RNU6-490P-201ENST00000362985 107 ntBASIC4.29□□□□□ -1.72
ATF4P18848 SNORA51.1-201ENST00000363243 140 ntBASIC4.29□□□□□ -1.72
ATF4P18848 Y_RNA.132-201ENST00000363421 102 ntBASIC4.29□□□□□ -1.72
ATF4P18848 RNU6-842P-201ENST00000384269 107 ntBASIC4.29□□□□□ -1.72
ATF4P18848 SNORA41-201ENST00000384675 132 ntBASIC4.29□□□□□ -1.72
ATF4P18848 RNU6-331P-201ENST00000384724 107 ntBASIC4.29□□□□□ -1.72
ATF4P18848 MIR521-1-201ENST00000384902 87 ntBASIC4.29□□□□□ -1.72
ATF4P18848 RNA5SP372-201ENST00000390836 115 ntBASIC4.29□□□□□ -1.72
ATF4P18848 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.29□□□□□ -1.72
ATF4P18848 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.29□□□□□ -1.72
ATF4P18848 AC006946.1-201ENST00000429106 328 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AC087650.1-201ENST00000431445 468 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AL137792.2-201ENST00000443484 235 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.29□□□□□ -1.72
ATF4P18848 AC013470.1-201ENST00000453438 462 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AC103987.1-201ENST00000473394 348 ntBASIC4.29□□□□□ -1.72
ATF4P18848 RPS17P15-201ENST00000475609 349 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.29□□□□□ -1.72
ATF4P18848 PTP4A1P4-201ENST00000512479 322 ntBASIC4.29□□□□□ -1.72
ATF4P18848 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.29□□□□□ -1.72
ATF4P18848 SCARNA16.2-201ENST00000516520 172 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AC021678.3-201ENST00000517893 476 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AC027308.1-201ENST00000517993 110 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.29□□□□□ -1.72
ATF4P18848 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.29□□□□□ -1.72
ATF4P18848 AC023442.1-201ENST00000531247 422 ntBASIC4.29□□□□□ -1.72
ATF4P18848 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms