Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 SNORA16B-201ENST00000364674 135 ntBASIC1.87□□□□□ -2.11
ATF1P18846 RNA5SP125-201ENST00000364843 120 ntBASIC1.87□□□□□ -2.11
ATF1P18846 RNU6-637P-201ENST00000384050 107 ntBASIC1.87□□□□□ -2.11
ATF1P18846 MIR218-1-201ENST00000384999 110 ntBASIC1.87□□□□□ -2.11
ATF1P18846 RNU6-952P-201ENST00000391164 108 ntBASIC1.87□□□□□ -2.11
ATF1P18846 CYCSP48-201ENST00000417124 323 ntBASIC1.87□□□□□ -2.11
ATF1P18846 HMGB1P49-201ENST00000418882 569 ntBASIC1.87□□□□□ -2.11
ATF1P18846 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.87□□□□□ -2.11
ATF1P18846 AL451054.2-201ENST00000420896 202 ntBASIC1.87□□□□□ -2.11
ATF1P18846 BPY2DP-201ENST00000422208 265 ntBASIC1.87□□□□□ -2.11
ATF1P18846 SRIP2-201ENST00000428470 166 ntBASIC1.87□□□□□ -2.11
ATF1P18846 HMGB1P9-201ENST00000429856 646 ntBASIC1.87□□□□□ -2.11
ATF1P18846 AC236972.1-201ENST00000433225 199 ntBASIC1.87□□□□□ -2.11
ATF1P18846 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.87□□□□□ -2.11
ATF1P18846 MTND2P20-201ENST00000440805 661 ntBASIC1.87□□□□□ -2.11
ATF1P18846 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.87□□□□□ -2.11
ATF1P18846 AL118520.1-201ENST00000450770 291 ntBASIC1.87□□□□□ -2.11
ATF1P18846 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.87□□□□□ -2.11
ATF1P18846 RNU7-136P-201ENST00000458819 69 ntBASIC1.87□□□□□ -2.11
ATF1P18846 snoU13.8-201ENST00000458890 104 ntBASIC1.87□□□□□ -2.11
ATF1P18846 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.87□□□□□ -2.11
ATF1P18846 RPL23AP49-201ENST00000492925 468 ntBASIC1.87□□□□□ -2.11
ATF1P18846 AC022447.1-201ENST00000515358 464 ntBASIC1.87□□□□□ -2.11
ATF1P18846 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.87□□□□□ -2.11
ATF1P18846 AP005902.1-201ENST00000521358 186 ntBASIC1.87□□□□□ -2.11
ATF1P18846 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
ATF1P18846 AC010186.2-204ENST00000537668 439 ntBASIC1.87□□□□□ -2.11
ATF1P18846 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.87□□□□□ -2.11
ATF1P18846 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.87□□□□□ -2.11
ATF1P18846 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.87□□□□□ -2.11
ATF1P18846 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.87□□□□□ -2.11
ATF1P18846 AL390838.2-201ENST00000602394 274 ntBASIC1.87□□□□□ -2.11
ATF1P18846 AC007938.3-201ENST00000604965 623 ntBASIC1.87□□□□□ -2.11
ATF1P18846 AL138478.1-201ENST00000612252 832 ntBASIC1.87□□□□□ -2.11
ATF1P18846 AC024257.5-201ENST00000612739 531 ntBASIC1.87□□□□□ -2.11
ATF1P18846 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.87□□□□□ -2.11
ATF1P18846 AC007998.5-201ENST00000622938 237 ntBASIC1.87□□□□□ -2.11
ATF1P18846 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.87□□□□□ -2.11
ATF1P18846 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ATF1P18846 AP005901.5-201ENST00000545779 1796 ntBASIC1.87□□□□□ -2.11
ATF1P18846 CDR1-202ENST00000625883 1485 ntBASIC1.87□□□□□ -2.11
ATF1P18846 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.87□□□□□ -2.11
ATF1P18846 AC010889.1-201ENST00000566193 2666 ntBASIC1.86□□□□□ -2.11
ATF1P18846 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ATF1P18846 HSPE1P11-201ENST00000339579 310 ntBASIC1.86□□□□□ -2.11
ATF1P18846 RPL7P27-201ENST00000403775 720 ntBASIC1.86□□□□□ -2.11
ATF1P18846 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.86□□□□□ -2.11
ATF1P18846 AC068533.2-201ENST00000411872 306 ntBASIC1.86□□□□□ -2.11
ATF1P18846 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.86□□□□□ -2.11
ATF1P18846 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.86□□□□□ -2.11
ATF1P18846 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.86□□□□□ -2.11
ATF1P18846 MED14P1-201ENST00000430517 648 ntBASIC1.86□□□□□ -2.11
ATF1P18846 GTF2IP7-202ENST00000436677 309 ntBASIC1.86□□□□□ -2.11
ATF1P18846 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.86□□□□□ -2.11
ATF1P18846 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.86□□□□□ -2.11
ATF1P18846 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.86□□□□□ -2.11
ATF1P18846 AC072039.1-201ENST00000477611 581 ntBASIC1.86□□□□□ -2.11
ATF1P18846 RPS27AP10-201ENST00000496103 208 ntBASIC1.86□□□□□ -2.11
ATF1P18846 MTCYBP16-201ENST00000509187 1129 ntBASIC1.86□□□□□ -2.11
ATF1P18846 AC008837.1-201ENST00000511513 412 ntBASIC1.86□□□□□ -2.11
ATF1P18846 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.86□□□□□ -2.11
ATF1P18846 AC114781.4-201ENST00000513707 639 ntBASIC1.86□□□□□ -2.11
ATF1P18846 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.86□□□□□ -2.11
ATF1P18846 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.86□□□□□ -2.11
ATF1P18846 AP003497.1-201ENST00000528472 562 ntBASIC1.86□□□□□ -2.11
ATF1P18846 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.86□□□□□ -2.11
ATF1P18846 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.86□□□□□ -2.11
ATF1P18846 AC002545.1-201ENST00000592511 181 ntBASIC1.86□□□□□ -2.11
ATF1P18846 DNAJC19P3-201ENST00000594491 331 ntBASIC1.86□□□□□ -2.11
ATF1P18846 AL139344.1-201ENST00000605228 195 ntBASIC1.86□□□□□ -2.11
ATF1P18846 AC007349.4-201ENST00000608114 532 ntBASIC1.86□□□□□ -2.11
ATF1P18846 AL445264.1-201ENST00000621719 171 ntBASIC1.86□□□□□ -2.11
ATF1P18846 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.86□□□□□ -2.11
ATF1P18846 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.86□□□□□ -2.11
ATF1P18846 AC243829.7-201ENST00000633081 225 ntBASIC1.86□□□□□ -2.11
ATF1P18846 AC091948.2-201ENST00000636510 279 ntBASIC1.86□□□□□ -2.11
ATF1P18846 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
ATF1P18846 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ATF1P18846 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.86□□□□□ -2.11
ATF1P18846 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
ATF1P18846 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
ATF1P18846 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
ATF1P18846 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
ATF1P18846 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.85□□□□□ -2.11
ATF1P18846 RNA5SP289-201ENST00000362332 137 ntBASIC1.85□□□□□ -2.11
ATF1P18846 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
ATF1P18846 RNU6-1083P-201ENST00000384022 107 ntBASIC1.85□□□□□ -2.11
ATF1P18846 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
ATF1P18846 SNORD23.1-201ENST00000408212 104 ntBASIC1.85□□□□□ -2.11
ATF1P18846 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.85□□□□□ -2.11
ATF1P18846 AC007560.1-201ENST00000426912 237 ntBASIC1.85□□□□□ -2.11
ATF1P18846 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.85□□□□□ -2.11
ATF1P18846 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.85□□□□□ -2.11
ATF1P18846 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.85□□□□□ -2.11
ATF1P18846 IPO7P1-201ENST00000442031 636 ntBASIC1.85□□□□□ -2.11
ATF1P18846 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.85□□□□□ -2.11
ATF1P18846 MTCYBP42-201ENST00000444653 1130 ntBASIC1.85□□□□□ -2.11
ATF1P18846 EEF1B2P7-201ENST00000451177 676 ntBASIC1.85□□□□□ -2.11
ATF1P18846 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.85□□□□□ -2.11
ATF1P18846 RPL31P50-201ENST00000471002 296 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms