Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 GTF2IP20-201ENST00000431663 360 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 VN1R34P-201ENST00000447387 883 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 snoU13.4-201ENST00000458916 104 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 U3.44-201ENST00000458938 192 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 MRPS17P3-201ENST00000465453 385 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 RN7SL594P-201ENST00000470590 287 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 RPS29P25-201ENST00000481709 171 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC074344.1-201ENST00000512823 224 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 FTH1P9-201ENST00000513251 355 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 GMPSP1-201ENST00000514075 579 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 RN7SKP13-201ENST00000515933 244 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 RNU6-390P-201ENST00000516259 103 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 IGKV2D-23-201ENST00000518179 286 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 AL020997.2-201ENST00000602607 184 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DOBP13765 AL020991.1-201ENST00000612314 373 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC130324.3-201ENST00000614165 542 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC010133.1-201ENST00000615809 842 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 U7.8-201ENST00000619968 63 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 CR392039.5-201ENST00000623201 510 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC093648.1-201ENST00000623546 606 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC012442.3-202ENST00000636742 206 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DOBP13765 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 AC006020.1-201ENST00000420179 1854 ntBASIC3.13□□□□□ -1.91
HLA-DOBP13765 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HLA-DOBP13765 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.13□□□□□ -1.91
HLA-DOBP13765 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DOBP13765 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DOBP13765 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DOBP13765 Y_RNA.38-201ENST00000362617 102 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 RNU6-179P-201ENST00000363350 107 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 RNU6-188P-201ENST00000364207 107 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 SNORA73.2-201ENST00000364946 201 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 RNU6-996P-201ENST00000365438 107 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DOBP13765 AL078595.1-201ENST00000404458 226 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AL356967.1-201ENST00000406305 431 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 RNA5SP118-201ENST00000410385 109 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 RPL30P2-201ENST00000414021 291 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 RPL17P36-201ENST00000420302 549 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC018644.1-201ENST00000429934 551 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 GMFBP1-201ENST00000467831 427 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC006512.1-201ENST00000468816 291 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC078785.3-201ENST00000476607 425 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC108860.1-201ENST00000484521 383 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC069439.1-201ENST00000494739 167 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 PCBP2P3-201ENST00000509726 843 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC004062.1-201ENST00000509926 645 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 RNU6-358P-201ENST00000516564 75 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 SNRPGP16-201ENST00000533275 226 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 MIR4644-201ENST00000579929 84 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC067852.3-201ENST00000589177 561 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC060780.3-201ENST00000589464 80 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 AL355073.2-201ENST00000612106 557 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AP001486.3-201ENST00000615334 372 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AL354950.2-201ENST00000617939 290 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 uc_338.11-201ENST00000619132 160 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 DUXAP9-208ENST00000622815 614 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 AL034408.1-202ENST00000636088 415 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 AC138649.5-201ENST00000637456 137 ntBASIC3.12□□□□□ -1.91
HLA-DOBP13765 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HLA-DOBP13765 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.12□□□□□ -1.91
HLA-DOBP13765 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.11□□□□□ -1.91
HLA-DOBP13765 DEFB108F-201ENST00000344638 222 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 RNU6-451P-201ENST00000362921 107 ntBASIC3.11□□□□□ -1.91
HLA-DOBP13765 SNORA62.1-201ENST00000364287 154 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms