Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.04□□□□□ -2.24
COL6A3P12111 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.04□□□□□ -2.24
COL6A3P12111 MIR4802-201ENST00000581881 80 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 uc_338.22-201ENST00000622722 187 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 AC024595.1-201ENST00000623088 387 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.04□□□□□ -2.24
COL6A3P12111 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
COL6A3P12111 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 Y_RNA.228-201ENST00000364346 98 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 RNU1-52P-201ENST00000384190 164 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 RNA5SP492-201ENST00000411330 114 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 snoU109.1-201ENST00000459339 135 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 RPS23P3-201ENST00000470993 430 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 RPL7P18-201ENST00000478965 734 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A3P12111 RPS27AP18-201ENST00000515536 459 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 AP004607.1-201ENST00000524456 203 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A3P12111 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A3P12111 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.04□□□□□ -2.24
COL6A3P12111 AC091057.2-201ENST00000602594 792 ntBASIC1.04□□□□□ -2.24
COL6A3P12111 MIR329-1-201ENST00000385028 80 ntBASIC1.03□□□□□ -2.24
COL6A3P12111 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.03□□□□□ -2.24
COL6A3P12111 AC096751.1-202ENST00000502691 1067 ntBASIC1.03□□□□□ -2.24
COL6A3P12111 AC005156.1-201ENST00000613371 573 ntBASIC1.03□□□□□ -2.24
COL6A3P12111 AC073544.1-201ENST00000600110 1595 ntBASIC1.03□□□□□ -2.24
COL6A3P12111 RPL7P27-201ENST00000403775 720 ntBASIC1.03□□□□□ -2.24
COL6A3P12111 AC096632.1-201ENST00000427395 310 ntBASIC1.03□□□□□ -2.24
COL6A3P12111 AL360221.1-201ENST00000445989 335 ntBASIC1.03□□□□□ -2.24
COL6A3P12111 AC012170.1-201ENST00000495139 359 ntBASIC1.03□□□□□ -2.24
COL6A3P12111 MTCO2P9-201ENST00000503214 694 ntBASIC1.03□□□□□ -2.24
COL6A3P12111 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.03□□□□□ -2.24
COL6A3P12111 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.03□□□□□ -2.24
COL6A3P12111 AC068620.3-201ENST00000602749 560 ntBASIC1.03□□□□□ -2.24
COL6A3P12111 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.03□□□□□ -2.24
COL6A3P12111 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.03□□□□□ -2.25
COL6A3P12111 MIR153-2-201ENST00000385225 87 ntBASIC1.02□□□□□ -2.25
COL6A3P12111 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.02□□□□□ -2.25
COL6A3P12111 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.02□□□□□ -2.25
COL6A3P12111 SEM1P1-201ENST00000506694 209 ntBASIC1.02□□□□□ -2.25
COL6A3P12111 AC097655.1-201ENST00000635075 318 ntBASIC1.02□□□□□ -2.25
COL6A3P12111 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.02□□□□□ -2.25
COL6A3P12111 Y_RNA.453-201ENST00000384223 109 ntBASIC1.02□□□□□ -2.25
COL6A3P12111 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.02□□□□□ -2.25
COL6A3P12111 AL031663.1-201ENST00000437445 219 ntBASIC1.02□□□□□ -2.25
COL6A3P12111 SNORD114-3-201ENST00000364969 75 ntBASIC1.02□□□□□ -2.25
COL6A3P12111 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.02□□□□□ -2.25
COL6A3P12111 ZNF192P1-203ENST00000565888 810 ntBASIC1.02□□□□□ -2.25
COL6A3P12111 AC006001.4-201ENST00000622243 395 ntBASIC1.02□□□□□ -2.25
COL6A3P12111 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.01□□□□□ -2.25
COL6A3P12111 Y_RNA.65-201ENST00000362846 100 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 FTH1P15-201ENST00000406984 280 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.01□□□□□ -2.25
COL6A3P12111 MTND5P25-201ENST00000430499 799 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 AC104692.1-201ENST00000472406 90 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A3P12111 SNORA31.20-201ENST00000517111 133 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A3P12111 AC112503.2-201ENST00000609005 552 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 AC004943.3-201ENST00000624116 600 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
COL6A3P12111 AL159152.1-201ENST00000635019 2587 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.01□□□□□ -2.25
COL6A3P12111 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.01□□□□□ -2.25
COL6A3P12111 AC067942.3-201ENST00000512025 362 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 RNU6-758P-201ENST00000516292 89 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 AC239860.2-201ENST00000525886 270 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 OR4G3P-201ENST00000633500 913 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 AL161722.3-201ENST00000605789 2983 ntBASIC1.01□□□□□ -2.25
COL6A3P12111 RNU6-234P-201ENST00000365229 104 ntBASIC1□□□□□ -2.25
COL6A3P12111 MIR144-201ENST00000384886 86 ntBASIC1□□□□□ -2.25
COL6A3P12111 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1□□□□□ -2.25
COL6A3P12111 ISCA1P1-201ENST00000426679 387 ntBASIC1□□□□□ -2.25
COL6A3P12111 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1□□□□□ -2.25
COL6A3P12111 GDI2P2-201ENST00000445131 608 ntBASIC1□□□□□ -2.25
COL6A3P12111 DPRXP5-201ENST00000604662 539 ntBASIC1□□□□□ -2.25
COL6A3P12111 MIR6840-201ENST00000611937 71 ntBASIC1□□□□□ -2.25
COL6A3P12111 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1□□□□□ -2.25
COL6A3P12111 AC093281.2-201ENST00000510153 597 ntBASIC1□□□□□ -2.25
COL6A3P12111 AL133393.1-201ENST00000603277 287 ntBASIC1□□□□□ -2.25
COL6A3P12111 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1□□□□□ -2.25
COL6A3P12111 MIR329-2-201ENST00000385029 84 ntBASIC1□□□□□ -2.25
COL6A3P12111 AC097499.1-201ENST00000444277 208 ntBASIC1□□□□□ -2.25
COL6A3P12111 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1□□□□□ -2.25
COL6A3P12111 RPL26P9-201ENST00000457466 433 ntBASIC1□□□□□ -2.25
COL6A3P12111 SNORA36.1-201ENST00000363424 132 ntBASIC0.99□□□□□ -2.25
COL6A3P12111 RNA5SP368-201ENST00000364298 116 ntBASIC0.99□□□□□ -2.25
COL6A3P12111 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
COL6A3P12111 RPL21P24-201ENST00000413752 448 ntBASIC0.99□□□□□ -2.25
COL6A3P12111 HMGB1P9-201ENST00000429856 646 ntBASIC0.99□□□□□ -2.25
COL6A3P12111 AL121601.2-201ENST00000438019 707 ntBASIC0.99□□□□□ -2.25
COL6A3P12111 snoU13.11-201ENST00000459219 104 ntBASIC0.99□□□□□ -2.25
COL6A3P12111 HMGN1P10-201ENST00000474557 553 ntBASIC0.99□□□□□ -2.25
COL6A3P12111 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
COL6A3P12111 SSXP9-201ENST00000417503 292 ntBASIC0.99□□□□□ -2.25
COL6A3P12111 OR4R1P-201ENST00000529879 463 ntBASIC0.99□□□□□ -2.25
COL6A3P12111 C2orf27A-204ENST00000623058 969 ntBASIC0.99□□□□□ -2.25
COL6A3P12111 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.98□□□□□ -2.25
COL6A3P12111 AL078605.1-201ENST00000603529 500 ntBASIC0.98□□□□□ -2.25
COL6A3P12111 HSPE1P14-201ENST00000605812 302 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms