Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MTND2P2-201ENST00000434633 945 ntBASIC1.45□□□□□ -2.18
TOP2AP11388 AL022238.1-201ENST00000442557 355 ntBASIC1.45□□□□□ -2.18
TOP2AP11388 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.45□□□□□ -2.18
TOP2AP11388 MIR4658-201ENST00000584344 65 ntBASIC1.45□□□□□ -2.18
TOP2AP11388 AC243773.3-201ENST00000613270 256 ntBASIC1.45□□□□□ -2.18
TOP2AP11388 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.45□□□□□ -2.18
TOP2AP11388 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TOP2AP11388 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TOP2AP11388 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.44□□□□□ -2.18
TOP2AP11388 UBE2V1P9-201ENST00000414760 368 ntBASIC1.44□□□□□ -2.18
TOP2AP11388 AL121769.1-201ENST00000469473 401 ntBASIC1.44□□□□□ -2.18
TOP2AP11388 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.44□□□□□ -2.18
TOP2AP11388 SNORA7.2-201ENST00000364446 145 ntBASIC1.43□□□□□ -2.18
TOP2AP11388 AL161449.1-201ENST00000414531 1199 ntBASIC1.43□□□□□ -2.18
TOP2AP11388 AC103833.1-201ENST00000517442 172 ntBASIC1.43□□□□□ -2.18
TOP2AP11388 CR383656.8-201ENST00000549046 145 ntBASIC1.43□□□□□ -2.18
TOP2AP11388 AC009902.3-201ENST00000606235 2172 ntBASIC1.43□□□□□ -2.18
TOP2AP11388 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.42□□□□□ -2.18
TOP2AP11388 RNU6-882P-201ENST00000391025 103 ntBASIC1.42□□□□□ -2.18
TOP2AP11388 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.42□□□□□ -2.18
TOP2AP11388 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.42□□□□□ -2.18
TOP2AP11388 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.42□□□□□ -2.18
TOP2AP11388 AC092989.1-201ENST00000481235 277 ntBASIC1.42□□□□□ -2.18
TOP2AP11388 AC026801.1-201ENST00000497178 464 ntBASIC1.42□□□□□ -2.18
TOP2AP11388 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.42□□□□□ -2.18
TOP2AP11388 IMMP1LP2-201ENST00000552954 492 ntBASIC1.42□□□□□ -2.18
TOP2AP11388 AL160236.1-201ENST00000556317 195 ntBASIC1.42□□□□□ -2.18
TOP2AP11388 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.42□□□□□ -2.18
TOP2AP11388 AC091304.6-201ENST00000619761 202 ntBASIC1.42□□□□□ -2.18
TOP2AP11388 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TOP2AP11388 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TOP2AP11388 SNORD114-2-201ENST00000363953 78 ntBASIC1.41□□□□□ -2.18
TOP2AP11388 AL356867.1-201ENST00000429623 299 ntBASIC1.41□□□□□ -2.18
TOP2AP11388 AC005534.2-201ENST00000431047 433 ntBASIC1.41□□□□□ -2.18
TOP2AP11388 AC097493.1-201ENST00000463958 372 ntBASIC1.41□□□□□ -2.18
TOP2AP11388 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.41□□□□□ -2.18
TOP2AP11388 RNU6-928P-201ENST00000516876 104 ntBASIC1.41□□□□□ -2.18
TOP2AP11388 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TOP2AP11388 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC1.41□□□□□ -2.18
TOP2AP11388 ZNF519P1-201ENST00000449011 1626 ntBASIC1.41□□□□□ -2.18
TOP2AP11388 DEFB108F-201ENST00000344638 222 ntBASIC1.4□□□□□ -2.18
TOP2AP11388 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.4□□□□□ -2.18
TOP2AP11388 RNU4-65P-201ENST00000410473 140 ntBASIC1.4□□□□□ -2.18
TOP2AP11388 EBAG9P1-201ENST00000418955 543 ntBASIC1.4□□□□□ -2.18
TOP2AP11388 AC005410.1-202ENST00000460347 485 ntBASIC1.4□□□□□ -2.18
TOP2AP11388 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.4□□□□□ -2.18
TOP2AP11388 RNU6-17P-201ENST00000384245 107 ntBASIC1.4□□□□□ -2.19
TOP2AP11388 RNU6-18P-201ENST00000384527 107 ntBASIC1.4□□□□□ -2.19
TOP2AP11388 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
TOP2AP11388 RNA5SP450-201ENST00000411206 102 ntBASIC1.4□□□□□ -2.19
TOP2AP11388 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.4□□□□□ -2.19
TOP2AP11388 AC233728.2-201ENST00000425348 757 ntBASIC1.4□□□□□ -2.19
TOP2AP11388 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.4□□□□□ -2.19
TOP2AP11388 PMCHL2-203ENST00000457791 237 ntBASIC1.4□□□□□ -2.19
TOP2AP11388 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.4□□□□□ -2.19
TOP2AP11388 RNA5SP354-201ENST00000391247 136 ntBASIC1.39□□□□□ -2.19
TOP2AP11388 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.39□□□□□ -2.19
TOP2AP11388 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.39□□□□□ -2.19
TOP2AP11388 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.39□□□□□ -2.19
TOP2AP11388 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.39□□□□□ -2.19
TOP2AP11388 NEFMP1-201ENST00000443423 1006 ntBASIC1.39□□□□□ -2.19
TOP2AP11388 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.39□□□□□ -2.19
TOP2AP11388 RNU6-970P-201ENST00000516312 107 ntBASIC1.39□□□□□ -2.19
TOP2AP11388 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.39□□□□□ -2.19
TOP2AP11388 AC008269.2-201ENST00000561915 1105 ntBASIC1.39□□□□□ -2.19
TOP2AP11388 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TOP2AP11388 AC008163.1-202ENST00000636004 2889 ntBASIC1.38□□□□□ -2.19
TOP2AP11388 RNU6-37P-201ENST00000362692 107 ntBASIC1.38□□□□□ -2.19
TOP2AP11388 SNORA38-201ENST00000363946 132 ntBASIC1.38□□□□□ -2.19
TOP2AP11388 RNU6-11P-201ENST00000364234 107 ntBASIC1.38□□□□□ -2.19
TOP2AP11388 CCNB2P1-201ENST00000399411 1150 ntBASIC1.38□□□□□ -2.19
TOP2AP11388 CIR1P3-201ENST00000405137 479 ntBASIC1.38□□□□□ -2.19
TOP2AP11388 AL591034.1-201ENST00000407447 340 ntBASIC1.38□□□□□ -2.19
TOP2AP11388 AC117503.1-201ENST00000472241 394 ntBASIC1.38□□□□□ -2.19
TOP2AP11388 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.38□□□□□ -2.19
TOP2AP11388 BTF3P12-201ENST00000519620 469 ntBASIC1.38□□□□□ -2.19
TOP2AP11388 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.38□□□□□ -2.19
TOP2AP11388 U8.14-201ENST00000390843 143 ntBASIC1.37□□□□□ -2.19
TOP2AP11388 AL133384.1-201ENST00000412744 351 ntBASIC1.37□□□□□ -2.19
TOP2AP11388 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.37□□□□□ -2.19
TOP2AP11388 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.37□□□□□ -2.19
TOP2AP11388 MIR6513-201ENST00000621188 64 ntBASIC1.37□□□□□ -2.19
TOP2AP11388 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.37□□□□□ -2.19
TOP2AP11388 AC008133.2-201ENST00000624540 351 ntBASIC1.37□□□□□ -2.19
TOP2AP11388 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
TOP2AP11388 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
TOP2AP11388 SNORA51.12-201ENST00000384448 134 ntBASIC1.36□□□□□ -2.19
TOP2AP11388 RPL31P52-201ENST00000407532 367 ntBASIC1.36□□□□□ -2.19
TOP2AP11388 RNU2-41P-201ENST00000410991 178 ntBASIC1.36□□□□□ -2.19
TOP2AP11388 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.36□□□□□ -2.19
TOP2AP11388 RPL30P11-201ENST00000495304 339 ntBASIC1.36□□□□□ -2.19
TOP2AP11388 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.36□□□□□ -2.19
TOP2AP11388 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TOP2AP11388 AL109918.3-201ENST00000603072 338 ntBASIC1.36□□□□□ -2.19
TOP2AP11388 NUTF2P8-201ENST00000604593 363 ntBASIC1.36□□□□□ -2.19
TOP2AP11388 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.36□□□□□ -2.19
TOP2AP11388 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
TOP2AP11388 MIR153-1-201ENST00000384914 90 ntBASIC1.35□□□□□ -2.19
TOP2AP11388 AC107032.1-201ENST00000485945 480 ntBASIC1.35□□□□□ -2.19
TOP2AP11388 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms