Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC011611.1-201ENST00000552179 197 ntBASIC3.9□□□□□ -1.79
RHOP08100 PSMA3P-201ENST00000555485 635 ntBASIC3.9□□□□□ -1.79
RHOP08100 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.9□□□□□ -1.79
RHOP08100 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.9□□□□□ -1.79
RHOP08100 MIR4703-201ENST00000577728 79 ntBASIC3.9□□□□□ -1.79
RHOP08100 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.9□□□□□ -1.79
RHOP08100 MIR4424-201ENST00000585257 86 ntBASIC3.9□□□□□ -1.79
RHOP08100 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.9□□□□□ -1.79
RHOP08100 RNU6-89P-201ENST00000606519 100 ntBASIC3.9□□□□□ -1.79
RHOP08100 FRG1KP-201ENST00000623592 341 ntBASIC3.9□□□□□ -1.79
RHOP08100 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.9□□□□□ -1.79
RHOP08100 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
RHOP08100 MTND5P1-201ENST00000445440 1375 ntBASIC3.89□□□□□ -1.79
RHOP08100 EXOC5P1-201ENST00000510543 1969 ntBASIC3.89□□□□□ -1.79
RHOP08100 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RHOP08100 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RHOP08100 TAB3P1-202ENST00000452645 1634 ntBASIC3.89□□□□□ -1.79
RHOP08100 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.89□□□□□ -1.79
RHOP08100 RNU4-79P-201ENST00000362764 141 ntBASIC3.89□□□□□ -1.79
RHOP08100 Y_RNA.100-201ENST00000363141 102 ntBASIC3.89□□□□□ -1.79
RHOP08100 RNU6-960P-201ENST00000364056 120 ntBASIC3.89□□□□□ -1.79
RHOP08100 U3.12-201ENST00000364498 214 ntBASIC3.89□□□□□ -1.79
RHOP08100 RNA5SP167-201ENST00000365461 116 ntBASIC3.89□□□□□ -1.79
RHOP08100 Y_RNA.460-201ENST00000384255 102 ntBASIC3.89□□□□□ -1.79
RHOP08100 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.89□□□□□ -1.79
RHOP08100 RNA5SP39-201ENST00000411245 120 ntBASIC3.89□□□□□ -1.79
RHOP08100 MTND3P8-201ENST00000412909 339 ntBASIC3.89□□□□□ -1.79
RHOP08100 DUTP6-201ENST00000425573 462 ntBASIC3.89□□□□□ -1.79
RHOP08100 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RHOP08100 MRPL50P4-201ENST00000446432 475 ntBASIC3.89□□□□□ -1.79
RHOP08100 MTND1P18-201ENST00000448191 573 ntBASIC3.89□□□□□ -1.79
RHOP08100 snoU13.24-201ENST00000458998 104 ntBASIC3.89□□□□□ -1.79
RHOP08100 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.89□□□□□ -1.79
RHOP08100 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.89□□□□□ -1.79
RHOP08100 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.89□□□□□ -1.79
RHOP08100 AC026427.2-201ENST00000506228 536 ntBASIC3.89□□□□□ -1.79
RHOP08100 AC004062.1-201ENST00000509926 645 ntBASIC3.89□□□□□ -1.79
RHOP08100 AC112206.3-201ENST00000514578 389 ntBASIC3.89□□□□□ -1.79
RHOP08100 RN7SKP13-201ENST00000515933 244 ntBASIC3.89□□□□□ -1.79
RHOP08100 SNORA19.2-201ENST00000516013 114 ntBASIC3.89□□□□□ -1.79
RHOP08100 RNA5SP208-201ENST00000516156 78 ntBASIC3.89□□□□□ -1.79
RHOP08100 RNU7-30P-201ENST00000516835 62 ntBASIC3.89□□□□□ -1.79
RHOP08100 RNU6-1092P-201ENST00000516955 87 ntBASIC3.89□□□□□ -1.79
RHOP08100 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.89□□□□□ -1.79
RHOP08100 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.89□□□□□ -1.79
RHOP08100 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.89□□□□□ -1.79
RHOP08100 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.89□□□□□ -1.79
RHOP08100 NCAPGP2-201ENST00000557911 754 ntBASIC3.89□□□□□ -1.79
RHOP08100 ANP32BP3-201ENST00000559213 706 ntBASIC3.89□□□□□ -1.79
RHOP08100 MIR3200-201ENST00000580767 85 ntBASIC3.89□□□□□ -1.79
RHOP08100 AC024619.4-201ENST00000580924 316 ntBASIC3.89□□□□□ -1.79
RHOP08100 AC135507.2-201ENST00000612443 309 ntBASIC3.89□□□□□ -1.79
RHOP08100 AL442067.2-201ENST00000614033 363 ntBASIC3.89□□□□□ -1.79
RHOP08100 AC005858.4-201ENST00000623191 700 ntBASIC3.89□□□□□ -1.79
RHOP08100 AC244517.1-201ENST00000606030 2086 ntBASIC3.89□□□□□ -1.79
RHOP08100 PRO1804-201ENST00000623780 2050 ntBASIC3.89□□□□□ -1.79
RHOP08100 AL137003.2-201ENST00000606924 2538 ntBASIC3.89□□□□□ -1.79
RHOP08100 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.89□□□□□ -1.79
RHOP08100 MTND4P35-201ENST00000604257 1375 ntBASIC3.89□□□□□ -1.79
RHOP08100 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RHOP08100 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RHOP08100 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
RHOP08100 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RHOP08100 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RHOP08100 XIAPP3-201ENST00000312918 795 ntBASIC3.88□□□□□ -1.79
RHOP08100 AC007685.1-201ENST00000329806 452 ntBASIC3.88□□□□□ -1.79
RHOP08100 RNU6-179P-201ENST00000363350 107 ntBASIC3.88□□□□□ -1.79
RHOP08100 RNU6-1155P-201ENST00000363554 107 ntBASIC3.88□□□□□ -1.79
RHOP08100 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.88□□□□□ -1.79
RHOP08100 RNU6-38P-201ENST00000384085 107 ntBASIC3.88□□□□□ -1.79
RHOP08100 RNU6-1029P-201ENST00000384109 107 ntBASIC3.88□□□□□ -1.79
RHOP08100 SNORD37.1-201ENST00000390968 65 ntBASIC3.88□□□□□ -1.79
RHOP08100 RAC1P3-201ENST00000416129 580 ntBASIC3.88□□□□□ -1.79
RHOP08100 AL137014.1-201ENST00000420490 1226 ntBASIC3.88□□□□□ -1.79
RHOP08100 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.88□□□□□ -1.79
RHOP08100 AC073063.1-201ENST00000434352 607 ntBASIC3.88□□□□□ -1.79
RHOP08100 IFNA20P-201ENST00000436840 528 ntBASIC3.88□□□□□ -1.79
RHOP08100 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.88□□□□□ -1.79
RHOP08100 AL162389.1-201ENST00000449233 177 ntBASIC3.88□□□□□ -1.79
RHOP08100 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.88□□□□□ -1.79
RHOP08100 SNRPGP5-201ENST00000456003 220 ntBASIC3.88□□□□□ -1.79
RHOP08100 RNU6-333P-201ENST00000459117 107 ntBASIC3.88□□□□□ -1.79
RHOP08100 RNU7-180P-201ENST00000459240 63 ntBASIC3.88□□□□□ -1.79
RHOP08100 AC084198.1-201ENST00000477747 402 ntBASIC3.88□□□□□ -1.79
RHOP08100 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.88□□□□□ -1.79
RHOP08100 RNU6-1095P-201ENST00000516148 108 ntBASIC3.88□□□□□ -1.79
RHOP08100 Y_RNA.665-201ENST00000516177 98 ntBASIC3.88□□□□□ -1.79
RHOP08100 SNORA74D-201ENST00000516404 141 ntBASIC3.88□□□□□ -1.79
RHOP08100 RNA5SP503-201ENST00000517047 117 ntBASIC3.88□□□□□ -1.79
RHOP08100 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.88□□□□□ -1.79
RHOP08100 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.88□□□□□ -1.79
RHOP08100 AC093027.1-201ENST00000546698 429 ntBASIC3.88□□□□□ -1.79
RHOP08100 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.88□□□□□ -1.79
RHOP08100 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.88□□□□□ -1.79
RHOP08100 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.88□□□□□ -1.79
RHOP08100 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.88□□□□□ -1.79
RHOP08100 TPTEP1-208ENST00000636884 213 ntBASIC3.88□□□□□ -1.79
RHOP08100 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RHOP08100 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RHOP08100 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms