Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TRAV28-201ENST00000557548 323 ntBASIC2.12□□□□□ -2.07
CD74P04233 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.12□□□□□ -2.07
CD74P04233 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.12□□□□□ -2.07
CD74P04233 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.12□□□□□ -2.07
CD74P04233 MIR3117-201ENST00000584034 78 ntBASIC2.12□□□□□ -2.07
CD74P04233 AL353997.4-201ENST00000586196 166 ntBASIC2.12□□□□□ -2.07
CD74P04233 AL357094.1-201ENST00000603845 844 ntBASIC2.12□□□□□ -2.07
CD74P04233 AC090186.1-201ENST00000605991 572 ntBASIC2.12□□□□□ -2.07
CD74P04233 AC135507.1-201ENST00000607214 561 ntBASIC2.12□□□□□ -2.07
CD74P04233 AC027449.1-201ENST00000608890 407 ntBASIC2.12□□□□□ -2.07
CD74P04233 MIR7106-201ENST00000612419 65 ntBASIC2.12□□□□□ -2.07
CD74P04233 AL136981.2-201ENST00000617319 734 ntBASIC2.12□□□□□ -2.07
CD74P04233 AL391262.2-201ENST00000622466 494 ntBASIC2.12□□□□□ -2.07
CD74P04233 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.12□□□□□ -2.07
CD74P04233 AC004944.1-201ENST00000517807 3059 ntBASIC2.12□□□□□ -2.07
CD74P04233 AC005336.3-201ENST00000623833 2679 ntBASIC2.12□□□□□ -2.07
CD74P04233 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CD74P04233 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CD74P04233 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CD74P04233 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.11□□□□□ -2.07
CD74P04233 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CD74P04233 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CD74P04233 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CD74P04233 RNU5E-8P-201ENST00000363502 116 ntBASIC2.11□□□□□ -2.07
CD74P04233 RN7SKP226-201ENST00000364912 300 ntBASIC2.11□□□□□ -2.07
CD74P04233 Y_RNA.500-201ENST00000384466 111 ntBASIC2.11□□□□□ -2.07
CD74P04233 MIR9-1-201ENST00000385198 89 ntBASIC2.11□□□□□ -2.07
CD74P04233 MIR325-201ENST00000385260 98 ntBASIC2.11□□□□□ -2.07
CD74P04233 AL356057.3-201ENST00000402607 340 ntBASIC2.11□□□□□ -2.07
CD74P04233 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.11□□□□□ -2.07
CD74P04233 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.11□□□□□ -2.07
CD74P04233 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.11□□□□□ -2.07
CD74P04233 SEPT2P1-201ENST00000419651 180 ntBASIC2.11□□□□□ -2.07
CD74P04233 AC018630.2-202ENST00000422992 927 ntBASIC2.11□□□□□ -2.07
CD74P04233 PPP1R11P2-201ENST00000423543 382 ntBASIC2.11□□□□□ -2.07
CD74P04233 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.11□□□□□ -2.07
CD74P04233 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.11□□□□□ -2.07
CD74P04233 HSPE1P6-201ENST00000479457 291 ntBASIC2.11□□□□□ -2.07
CD74P04233 NDUFB4P2-201ENST00000509515 391 ntBASIC2.11□□□□□ -2.07
CD74P04233 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.11□□□□□ -2.07
CD74P04233 AC034159.1-201ENST00000513885 583 ntBASIC2.11□□□□□ -2.07
CD74P04233 BTF3P12-201ENST00000519620 469 ntBASIC2.11□□□□□ -2.07
CD74P04233 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.11□□□□□ -2.07
CD74P04233 AP003497.1-201ENST00000528472 562 ntBASIC2.11□□□□□ -2.07
CD74P04233 MTND4P33-201ENST00000556706 766 ntBASIC2.11□□□□□ -2.07
CD74P04233 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.11□□□□□ -2.07
CD74P04233 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.11□□□□□ -2.07
CD74P04233 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.11□□□□□ -2.07
CD74P04233 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.11□□□□□ -2.07
CD74P04233 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
CD74P04233 AL033523.1-201ENST00000605153 153 ntBASIC2.11□□□□□ -2.07
CD74P04233 AL603758.1-201ENST00000618654 241 ntBASIC2.11□□□□□ -2.07
CD74P04233 MIR6130-201ENST00000619419 109 ntBASIC2.11□□□□□ -2.07
CD74P04233 MIR6852-201ENST00000621699 66 ntBASIC2.11□□□□□ -2.07
CD74P04233 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.11□□□□□ -2.07
CD74P04233 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.11□□□□□ -2.07
CD74P04233 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.11□□□□□ -2.07
CD74P04233 ZNF876P-202ENST00000398732 1485 ntBASIC2.11□□□□□ -2.07
CD74P04233 AC011477.1-204ENST00000623416 1325 ntBASIC2.11□□□□□ -2.07
CD74P04233 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CD74P04233 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.1□□□□□ -2.07
CD74P04233 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.1□□□□□ -2.07
CD74P04233 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.1□□□□□ -2.07
CD74P04233 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CD74P04233 RNU6-853P-201ENST00000364306 107 ntBASIC2.1□□□□□ -2.07
CD74P04233 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.1□□□□□ -2.07
CD74P04233 RNU6-83P-201ENST00000384568 112 ntBASIC2.1□□□□□ -2.07
CD74P04233 SNORA41-201ENST00000384675 132 ntBASIC2.1□□□□□ -2.07
CD74P04233 MIR513B-201ENST00000385136 84 ntBASIC2.1□□□□□ -2.07
CD74P04233 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.1□□□□□ -2.07
CD74P04233 EEF1A1P41-201ENST00000414667 207 ntBASIC2.1□□□□□ -2.07
CD74P04233 Z85995.1-201ENST00000415547 335 ntBASIC2.1□□□□□ -2.07
CD74P04233 AC083875.1-201ENST00000419509 405 ntBASIC2.1□□□□□ -2.07
CD74P04233 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CD74P04233 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.1□□□□□ -2.07
CD74P04233 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.1□□□□□ -2.07
CD74P04233 AC098826.1-201ENST00000433943 471 ntBASIC2.1□□□□□ -2.07
CD74P04233 CR769776.1-201ENST00000441254 787 ntBASIC2.1□□□□□ -2.07
CD74P04233 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.1□□□□□ -2.07
CD74P04233 MTCYBP3-201ENST00000445588 1137 ntBASIC2.1□□□□□ -2.07
CD74P04233 AC104389.3-201ENST00000445629 235 ntBASIC2.1□□□□□ -2.07
CD74P04233 COX6CP12-201ENST00000446748 202 ntBASIC2.1□□□□□ -2.07
CD74P04233 RPL23AP35-201ENST00000451906 501 ntBASIC2.1□□□□□ -2.07
CD74P04233 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.1□□□□□ -2.07
CD74P04233 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.1□□□□□ -2.07
CD74P04233 EIF4EP3-201ENST00000498782 656 ntBASIC2.1□□□□□ -2.07
CD74P04233 TTC39CP1-201ENST00000512513 755 ntBASIC2.1□□□□□ -2.07
CD74P04233 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.1□□□□□ -2.07
CD74P04233 AC112673.1-201ENST00000513168 575 ntBASIC2.1□□□□□ -2.07
CD74P04233 RNU6-311P-201ENST00000516224 102 ntBASIC2.1□□□□□ -2.07
CD74P04233 RNU6-415P-201ENST00000516252 97 ntBASIC2.1□□□□□ -2.07
CD74P04233 RNU6-1256P-201ENST00000516539 103 ntBASIC2.1□□□□□ -2.07
CD74P04233 RNU6-840P-201ENST00000517275 65 ntBASIC2.1□□□□□ -2.07
CD74P04233 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.1□□□□□ -2.07
CD74P04233 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.1□□□□□ -2.07
CD74P04233 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.1□□□□□ -2.07
CD74P04233 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.1□□□□□ -2.07
CD74P04233 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.1□□□□□ -2.07
CD74P04233 ATP5F1P5-201ENST00000526403 760 ntBASIC2.1□□□□□ -2.07
CD74P04233 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 311.4 ms