Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 PSMA2P3-201ENST00000429685 675 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 RPL31P54-201ENST00000429803 370 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 MTND5P25-201ENST00000430499 799 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A1P02462 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A1P02462 AL158053.1-201ENST00000441503 453 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 HSFY3P-201ENST00000444242 1191 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A1P02462 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
COL4A1P02462 RNF138P1-201ENST00000502765 546 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 RNA5SP220-201ENST00000516298 104 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC087373.1-201ENST00000524920 491 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 OR8K4P-201ENST00000534608 872 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC092451.2-201ENST00000538746 658 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC135279.1-201ENST00000543493 504 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 NIFKP8-201ENST00000560500 874 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.64□□□□□ -2.15
COL4A1P02462 AL355812.1-201ENST00000603215 216 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 MIR8084-201ENST00000614105 89 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AP000676.4-201ENST00000624659 623 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A1P02462 AC116618.1-201ENST00000634617 774 ntBASIC1.64□□□□□ -2.15
COL4A1P02462 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.64□□□□□ -2.15
COL4A1P02462 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A1P02462 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A1P02462 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
COL4A1P02462 SNORA51.6-201ENST00000384151 125 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 RNU6-441P-201ENST00000384545 106 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 DSTNP4-201ENST00000399472 474 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A1P02462 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A1P02462 AL606495.1-201ENST00000422100 813 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.63□□□□□ -2.15
COL4A1P02462 MTCO2P1-201ENST00000424648 477 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 RPP40P1-201ENST00000426762 456 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 RPS6P15-201ENST00000431996 751 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.63□□□□□ -2.15
COL4A1P02462 RPS4XP11-201ENST00000446897 772 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 BX248409.1-201ENST00000455497 255 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 HMGN1P7-201ENST00000491722 313 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.63□□□□□ -2.15
COL4A1P02462 AC048346.1-201ENST00000510247 144 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AC092470.1-201ENST00000546187 132 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.63□□□□□ -2.15
COL4A1P02462 AC023825.1-201ENST00000566704 1030 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.63□□□□□ -2.15
COL4A1P02462 AC133794.1-201ENST00000602731 914 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AL133507.1-201ENST00000605269 557 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AC126118.1-201ENST00000607744 628 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AC013468.1-201ENST00000608680 598 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AC140725.3-201ENST00000616193 880 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AC078880.5-201ENST00000617845 421 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AC006213.5-201ENST00000619673 288 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 AC068880.4-201ENST00000623082 495 ntBASIC1.63□□□□□ -2.15
COL4A1P02462 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
COL4A1P02462 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
COL4A1P02462 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A1P02462 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A1P02462 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
COL4A1P02462 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A1P02462 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.62□□□□□ -2.15
COL4A1P02462 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
COL4A1P02462 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A1P02462 CD24P4-201ENST00000382840 243 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 RNU6-354P-201ENST00000383862 107 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 RNU6-610P-201ENST00000384264 107 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A1P02462 AC096533.1-201ENST00000411645 353 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 AL133384.1-201ENST00000412744 351 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 NUP35P2-201ENST00000416748 943 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.62□□□□□ -2.15
COL4A1P02462 HMGN2P30-201ENST00000423237 256 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 AC234064.1-201ENST00000436312 247 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.62□□□□□ -2.15
COL4A1P02462 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.62□□□□□ -2.15
COL4A1P02462 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.62□□□□□ -2.15
COL4A1P02462 AC017099.1-201ENST00000448261 1028 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.62□□□□□ -2.15
COL4A1P02462 KLRA1P-201ENST00000503499 986 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A1P02462 AC112518.2-201ENST00000508565 425 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 RNU6-334P-201ENST00000517072 102 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 AP004607.1-201ENST00000524456 203 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.62□□□□□ -2.15
COL4A1P02462 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.62□□□□□ -2.15
COL4A1P02462 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.62□□□□□ -2.15
COL4A1P02462 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.62□□□□□ -2.15
COL4A1P02462 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.62□□□□□ -2.15
COL4A1P02462 AP003973.1-201ENST00000604639 691 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 AC016542.1-201ENST00000608259 493 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 AL390240.1-201ENST00000612950 384 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 AC022709.1-201ENST00000615967 87 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.62□□□□□ -2.15
COL4A1P02462 AC095038.3-201ENST00000634439 195 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 MIR203B-201ENST00000636080 86 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 SGO1P1-201ENST00000603525 1447 ntBASIC1.62□□□□□ -2.15
COL4A1P02462 ZNF849P-201ENST00000594711 1566 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms