Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 RNU1-93P-201ENST00000364704 169 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 RNU6-891P-201ENST00000384280 111 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
COL1A1P02452 U3.29-201ENST00000391296 212 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AC010385.1-201ENST00000412374 256 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AL512504.1-201ENST00000415494 778 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.69□□□□□ -2.14
COL1A1P02452 MORF4L1P7-201ENST00000426038 703 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AL365496.1-201ENST00000426885 215 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 RPL7L1P10-201ENST00000427790 463 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 Z85994.2-201ENST00000434327 452 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.69□□□□□ -2.14
COL1A1P02452 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.69□□□□□ -2.14
COL1A1P02452 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.69□□□□□ -2.14
COL1A1P02452 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL1A1P02452 AC008427.1-201ENST00000503102 655 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 RNA5SP61-201ENST00000516453 100 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.69□□□□□ -2.14
COL1A1P02452 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.69□□□□□ -2.14
COL1A1P02452 OR1M4P-201ENST00000589199 287 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AC006329.2-201ENST00000611491 394 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AC079597.1-201ENST00000624306 508 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AC068620.4-201ENST00000636730 1182 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AL022578.1-201ENST00000439330 1433 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL1A1P02452 AP000648.3-201ENST00000623539 4507 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL1A1P02452 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL1A1P02452 RNU6-989P-201ENST00000362756 107 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 SNORA51.12-201ENST00000384448 134 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.69□□□□□ -2.14
COL1A1P02452 RNU6-712P-201ENST00000410558 100 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 RNU4-72P-201ENST00000410754 173 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 RNU6-564P-201ENST00000410983 104 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 TPMTP3-201ENST00000411928 735 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 SRIP3-201ENST00000413200 219 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AL136133.1-201ENST00000413694 376 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 ARL2BPP3-201ENST00000421226 480 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 PGBD4P3-201ENST00000440731 581 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 BZW1P2-201ENST00000473537 826 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 HMGB1P46-201ENST00000520062 610 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL1A1P02452 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.69□□□□□ -2.14
COL1A1P02452 MED28P6-201ENST00000558776 231 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.69□□□□□ -2.14
COL1A1P02452 AC245884.12-201ENST00000615364 59 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 AC098657.3-201ENST00000620434 263 ntBASIC1.69□□□□□ -2.14
COL1A1P02452 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL1A1P02452 AP000560.1-201ENST00000624150 1937 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.68□□□□□ -2.14
COL1A1P02452 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL1A1P02452 CR848007.1-201ENST00000442354 1699 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 SNORA38-201ENST00000363946 132 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 RNU6-234P-201ENST00000365229 104 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 MIR625-201ENST00000385047 85 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 Z75741.2-201ENST00000417272 1167 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.68□□□□□ -2.14
COL1A1P02452 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.68□□□□□ -2.14
COL1A1P02452 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL1A1P02452 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL1A1P02452 AL359273.1-201ENST00000510918 627 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 RNU6-491P-201ENST00000516099 110 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.68□□□□□ -2.14
COL1A1P02452 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.68□□□□□ -2.14
COL1A1P02452 RPL21P5-201ENST00000554662 472 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.68□□□□□ -2.14
COL1A1P02452 AC009127.3-201ENST00000570531 403 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 SUMO2P14-201ENST00000604488 293 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.68□□□□□ -2.14
COL1A1P02452 STMN1P1-201ENST00000617809 440 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 AC027309.3-201ENST00000623419 351 ntBASIC1.68□□□□□ -2.14
COL1A1P02452 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.67□□□□□ -2.14
COL1A1P02452 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
COL1A1P02452 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL1A1P02452 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL1A1P02452 SNORA68.1-201ENST00000364537 132 ntBASIC1.67□□□□□ -2.14
COL1A1P02452 RNU6-198P-201ENST00000384258 104 ntBASIC1.67□□□□□ -2.14
COL1A1P02452 RNU6-821P-201ENST00000390995 107 ntBASIC1.67□□□□□ -2.14
COL1A1P02452 HMGB3P31-201ENST00000413333 595 ntBASIC1.67□□□□□ -2.14
COL1A1P02452 KATNBL1P3-201ENST00000443475 909 ntBASIC1.67□□□□□ -2.14
COL1A1P02452 COX6CP12-201ENST00000446748 202 ntBASIC1.67□□□□□ -2.14
COL1A1P02452 PNPLA4P1-201ENST00000458328 305 ntBASIC1.67□□□□□ -2.14
COL1A1P02452 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.67□□□□□ -2.14
COL1A1P02452 Y_RNA.675-201ENST00000516389 149 ntBASIC1.67□□□□□ -2.14
COL1A1P02452 RNU6-1223P-201ENST00000517124 104 ntBASIC1.67□□□□□ -2.14
COL1A1P02452 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.67□□□□□ -2.14
COL1A1P02452 GLYCAM1-201ENST00000546596 285 ntBASIC1.67□□□□□ -2.14
COL1A1P02452 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.67□□□□□ -2.14
COL1A1P02452 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.67□□□□□ -2.14
COL1A1P02452 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.67□□□□□ -2.14
COL1A1P02452 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.67□□□□□ -2.14
COL1A1P02452 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.67□□□□□ -2.14
COL1A1P02452 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.66□□□□□ -2.14
COL1A1P02452 AC009902.3-201ENST00000606235 2172 ntBASIC1.66□□□□□ -2.14
COL1A1P02452 MTND5P10-201ENST00000603719 1809 ntBASIC1.66□□□□□ -2.14
COL1A1P02452 RNU6-173P-201ENST00000364215 104 ntBASIC1.66□□□□□ -2.14
COL1A1P02452 AL513475.1-201ENST00000406602 315 ntBASIC1.66□□□□□ -2.14
COL1A1P02452 AC234781.2-201ENST00000426370 994 ntBASIC1.66□□□□□ -2.14
COL1A1P02452 AC007560.1-201ENST00000426912 237 ntBASIC1.66□□□□□ -2.14
COL1A1P02452 AC079780.1-201ENST00000428259 207 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms