Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 EZH2P1-201ENST00000431167 291 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 HMGB3P8-201ENST00000449709 577 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 HMGN2P26-201ENST00000463169 339 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 AP000873.1-201ENST00000463987 400 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.15□□□□□ -1.75
CDKL5O76039 RNU6-1314P-201ENST00000517139 104 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 AC103843.2-201ENST00000530523 682 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.15□□□□□ -1.75
CDKL5O76039 AL161713.1-201ENST00000555538 145 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.15□□□□□ -1.75
CDKL5O76039 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
CDKL5O76039 PART1_1.1-201ENST00000611761 217 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 AL590099.1-201ENST00000615276 138 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 ASNSP3-201ENST00000451989 1306 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDKL5O76039 MFSD8-233ENST00000641482 4860 ntBASIC4.15□□□□□ -1.75
CDKL5O76039 MTND4P35-201ENST00000604257 1375 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 PWAR6-201ENST00000552334 4618 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CDKL5O76039 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
CDKL5O76039 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDKL5O76039 AC068647.1-201ENST00000489539 2265 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDKL5O76039 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDKL5O76039 SNORD9-201ENST00000362566 104 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 Y_RNA.184-201ENST00000363884 108 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 RNU4-48P-201ENST00000365559 182 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 RNU4-20P-201ENST00000365601 151 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 SNORD3H-201ENST00000384486 214 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 U3.29-201ENST00000391296 212 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 CYCSP19-201ENST00000411715 316 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 DUTP6-201ENST00000425573 462 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.14□□□□□ -1.75
CDKL5O76039 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.14□□□□□ -1.75
CDKL5O76039 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.14□□□□□ -1.75
CDKL5O76039 AL049714.1-201ENST00000466686 347 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 GMFBP1-201ENST00000467831 427 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 AC084357.1-201ENST00000473404 255 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 AC010683.1-201ENST00000473673 378 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CDKL5O76039 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.14□□□□□ -1.75
CDKL5O76039 AC026784.1-201ENST00000507986 352 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 AC114797.1-201ENST00000514003 728 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 RN7SKP18-201ENST00000516005 275 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 Vault.1-201ENST00000516474 102 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 AP006245.1-201ENST00000522549 120 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.14□□□□□ -1.75
CDKL5O76039 OR5BN1P-201ENST00000532955 829 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.14□□□□□ -1.75
CDKL5O76039 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.14□□□□□ -1.75
CDKL5O76039 AL442663.2-201ENST00000554385 511 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.14□□□□□ -1.75
CDKL5O76039 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDKL5O76039 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.14□□□□□ -1.75
CDKL5O76039 AL020997.2-201ENST00000602607 184 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 AC007687.1-201ENST00000602704 304 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 AC006254.3-201ENST00000603353 884 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.14□□□□□ -1.75
CDKL5O76039 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.14□□□□□ -1.75
CDKL5O76039 AL138713.1-201ENST00000624026 2130 ntBASIC4.14□□□□□ -1.75
CDKL5O76039 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.14□□□□□ -1.75
CDKL5O76039 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CDKL5O76039 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.14□□□□□ -1.75
CDKL5O76039 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.14□□□□□ -1.75
CDKL5O76039 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.13□□□□□ -1.75
CDKL5O76039 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDKL5O76039 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDKL5O76039 AL645937.1-201ENST00000641739 1652 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDKL5O76039 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDKL5O76039 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CDKL5O76039 RNA5SP167-201ENST00000365461 116 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.13□□□□□ -1.75
CDKL5O76039 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CDKL5O76039 RPL21P17-201ENST00000397467 475 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 MTND3P8-201ENST00000412909 339 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 AC009161.1-201ENST00000417306 376 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 AL645937.1-202ENST00000421799 937 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.13□□□□□ -1.75
CDKL5O76039 AC018644.1-201ENST00000429934 551 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 IFNA20P-201ENST00000436840 528 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 MTND3P16-201ENST00000452205 344 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 SNORD121B-201ENST00000458838 81 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 RPL23AP14-201ENST00000468281 468 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 COX7A2P2-201ENST00000505291 250 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.13□□□□□ -1.75
CDKL5O76039 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 AP003072.1-201ENST00000531740 145 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.13□□□□□ -1.75
CDKL5O76039 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.13□□□□□ -1.75
CDKL5O76039 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.13□□□□□ -1.75
CDKL5O76039 AC128657.1-201ENST00000549459 145 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.13□□□□□ -1.75
CDKL5O76039 BNIP3P5-201ENST00000562290 498 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 MTCO3P13-201ENST00000577757 781 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 COX6CP3-201ENST00000580869 223 ntBASIC4.13□□□□□ -1.75
CDKL5O76039 MIR4742-201ENST00000581069 85 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms