Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 RNA5SP56-201ENST00000410277 118 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 MTCO2P27-201ENST00000420740 428 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 BEND7P1-201ENST00000422058 457 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 PSMA2P3-201ENST00000429685 675 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP4O75379 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP4O75379 NOTCH2P1-201ENST00000443481 624 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 FGF7P3-201ENST00000454645 303 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.84□□□□□ -1.63
VAMP4O75379 AL162395.1-201ENST00000457882 422 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP4O75379 FTH1P2-201ENST00000466086 412 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP4O75379 Y_RNA.654-201ENST00000497848 106 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.84□□□□□ -1.63
VAMP4O75379 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.84□□□□□ -1.63
VAMP4O75379 RNU6-1170P-201ENST00000515974 106 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 RNU6-327P-201ENST00000516270 127 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 RNA5SP164-201ENST00000516533 110 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.84□□□□□ -1.63
VAMP4O75379 AL118558.2-201ENST00000556294 238 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.84□□□□□ -1.63
VAMP4O75379 AC244505.7-201ENST00000599675 272 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 AC092807.2-201ENST00000609367 243 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 AL390240.1-201ENST00000612950 384 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 AC005344.1-201ENST00000613391 459 ntBASIC4.84□□□□□ -1.63
VAMP4O75379 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.84□□□□□ -1.63
VAMP4O75379 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VAMP4O75379 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VAMP4O75379 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VAMP4O75379 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.84□□□□□ -1.63
VAMP4O75379 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
VAMP4O75379 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
VAMP4O75379 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.84□□□□□ -1.64
VAMP4O75379 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.83□□□□□ -1.64
VAMP4O75379 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.83□□□□□ -1.64
VAMP4O75379 AP001350.1-201ENST00000601906 1524 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP4O75379 GABPAP-201ENST00000419271 1356 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP4O75379 RNA5SP124-201ENST00000362739 110 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 RNU6-989P-201ENST00000362756 107 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.83□□□□□ -1.64
VAMP4O75379 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.83□□□□□ -1.64
VAMP4O75379 MTND2P23-201ENST00000422990 651 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP4O75379 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.83□□□□□ -1.64
VAMP4O75379 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.83□□□□□ -1.64
VAMP4O75379 PRPS1P1-201ENST00000445305 876 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 Y_RNA.639-201ENST00000458981 102 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 RPL37P6-202ENST00000464216 403 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 RPL7P23-201ENST00000493874 747 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.83□□□□□ -1.64
VAMP4O75379 AP001804.3-201ENST00000525146 880 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.83□□□□□ -1.64
VAMP4O75379 AC034105.4-201ENST00000568304 277 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 AC006254.3-201ENST00000603353 884 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 AL031176.1-201ENST00000604554 466 ntBASIC4.83□□□□□ -1.64
VAMP4O75379 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.83□□□□□ -1.64
VAMP4O75379 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP4O75379 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
VAMP4O75379 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP4O75379 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
VAMP4O75379 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.83□□□□□ -1.64
VAMP4O75379 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
VAMP4O75379 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
VAMP4O75379 ZNF33CP-201ENST00000432492 2030 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.82□□□□□ -1.64
VAMP4O75379 MAPK10-372ENST00000641954 3413 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AC103710.2-202ENST00000641454 2853 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP4O75379 RNU6-188P-201ENST00000364207 107 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 RNU6-43P-201ENST00000384302 107 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 Y_RNA.576-201ENST00000384781 102 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AL592114.1-201ENST00000403842 483 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AL121834.1-202ENST00000404494 277 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 MIR548P-201ENST00000408336 84 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 BRK1P2-201ENST00000442875 223 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AL451050.1-201ENST00000450126 415 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 RN7SL542P-201ENST00000467147 294 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.82□□□□□ -1.64
VAMP4O75379 BTF3L4P4-201ENST00000506381 449 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.82□□□□□ -1.64
VAMP4O75379 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.82□□□□□ -1.64
VAMP4O75379 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.82□□□□□ -1.64
VAMP4O75379 TRMT10BP1-201ENST00000519377 943 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.82□□□□□ -1.64
VAMP4O75379 AP003385.6-201ENST00000531603 374 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AC109635.4-202ENST00000531666 412 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.82□□□□□ -1.64
VAMP4O75379 FRG2DP-202ENST00000566967 323 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.82□□□□□ -1.64
VAMP4O75379 AL357559.1-201ENST00000622228 274 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AC039056.2-201ENST00000622261 511 ntBASIC4.82□□□□□ -1.64
VAMP4O75379 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.82□□□□□ -1.64
VAMP4O75379 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP4O75379 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP4O75379 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
VAMP4O75379 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms