Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC005410.1-202ENST00000460347 485 ntBASIC1.08□□□□□ -2.24
SSSCA1O60232 TRBV1-201ENST00000476502 284 ntBASIC1.08□□□□□ -2.24
SSSCA1O60232 AC008526.1-201ENST00000509149 338 ntBASIC1.08□□□□□ -2.24
SSSCA1O60232 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.08□□□□□ -2.24
SSSCA1O60232 AC068276.1-201ENST00000605793 379 ntBASIC1.08□□□□□ -2.24
SSSCA1O60232 MIR7843-201ENST00000622274 79 ntBASIC1.08□□□□□ -2.24
SSSCA1O60232 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.08□□□□□ -2.24
SSSCA1O60232 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
SSSCA1O60232 RNU1-72P-201ENST00000362976 153 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 RNU4-13P-201ENST00000364019 141 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 U3.13-201ENST00000364804 214 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 NPM1P10-201ENST00000398310 865 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 AL356421.1-201ENST00000403255 413 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 AL033519.2-201ENST00000403958 392 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 UBE2V1P9-201ENST00000414760 368 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 AC244453.4-201ENST00000419150 388 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 AC246680.2-201ENST00000422106 389 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 AC244035.1-201ENST00000430042 390 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.07□□□□□ -2.24
SSSCA1O60232 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SSSCA1O60232 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.07□□□□□ -2.24
SSSCA1O60232 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.07□□□□□ -2.24
SSSCA1O60232 UBL5P3-201ENST00000475112 231 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.07□□□□□ -2.24
SSSCA1O60232 RNU6-488P-201ENST00000515918 99 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 SCARNA3-201ENST00000517097 143 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 AC022616.2-201ENST00000523185 300 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.07□□□□□ -2.24
SSSCA1O60232 AC011611.5-201ENST00000552477 578 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
SSSCA1O60232 MIMT1-201ENST00000597105 1050 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 AP003400.5-201ENST00000624827 617 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
SSSCA1O60232 ZNF72P-201ENST00000425869 1908 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 AC091812.1-201ENST00000432235 1948 ntBASIC1.07□□□□□ -2.24
SSSCA1O60232 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
SSSCA1O60232 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.07□□□□□ -2.24
SSSCA1O60232 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.07□□□□□ -2.24
SSSCA1O60232 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
SSSCA1O60232 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 RNU6-1083P-201ENST00000384022 107 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 RNU6-441P-201ENST00000384545 106 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC016769.3-201ENST00000396562 315 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 HMGN2P39-201ENST00000398005 273 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AL356131.1-201ENST00000405826 414 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC023141.4-201ENST00000412031 328 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.06□□□□□ -2.24
SSSCA1O60232 FO393419.3-201ENST00000428741 282 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SSSCA1O60232 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.06□□□□□ -2.24
SSSCA1O60232 RAC1P7-201ENST00000445367 377 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.06□□□□□ -2.24
SSSCA1O60232 FAM92A1P2-202ENST00000504766 877 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC114786.4-201ENST00000508771 728 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC109464.2-201ENST00000510242 943 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC114797.1-201ENST00000514003 728 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 RN7SKP179-201ENST00000516126 217 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.06□□□□□ -2.24
SSSCA1O60232 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.06□□□□□ -2.24
SSSCA1O60232 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.06□□□□□ -2.24
SSSCA1O60232 AC091544.4-201ENST00000555268 342 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC023813.2-201ENST00000564321 469 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 ATP5F1P7-201ENST00000567330 760 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 MIR3921-201ENST00000577308 85 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.06□□□□□ -2.24
SSSCA1O60232 AC011494.1-201ENST00000596454 237 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.06□□□□□ -2.24
SSSCA1O60232 MIR7157-201ENST00000635801 60 ntBASIC1.06□□□□□ -2.24
SSSCA1O60232 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.06□□□□□ -2.24
SSSCA1O60232 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SSSCA1O60232 DEFB108F-201ENST00000344638 222 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 RNU6-60P-201ENST00000364792 103 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 RNU6-882P-201ENST00000391025 103 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 BTF3L4P2-201ENST00000392798 346 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 RNU6-174P-201ENST00000410406 106 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 RNU2-49P-201ENST00000410666 184 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 RNU2-41P-201ENST00000410991 178 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 OR51A3P-201ENST00000413596 924 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 HMGB1P49-201ENST00000418882 569 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 MICF-203ENST00000432679 129 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.05□□□□□ -2.24
SSSCA1O60232 AL592447.1-201ENST00000447592 540 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.05□□□□□ -2.24
SSSCA1O60232 HMGN2P10-201ENST00000448085 265 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.05□□□□□ -2.24
SSSCA1O60232 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.05□□□□□ -2.24
SSSCA1O60232 AC008481.1-201ENST00000463278 396 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 MTND4P2-201ENST00000507767 1203 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.05□□□□□ -2.24
SSSCA1O60232 RNU6-295P-201ENST00000516901 104 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 DEFB108D-201ENST00000527787 222 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 AP004247.1-201ENST00000531556 1289 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.05□□□□□ -2.24
SSSCA1O60232 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.05□□□□□ -2.24
SSSCA1O60232 AL391261.3-201ENST00000557194 520 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.05□□□□□ -2.24
SSSCA1O60232 AL035411.2-201ENST00000604022 421 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 AC016925.2-201ENST00000605108 242 ntBASIC1.05□□□□□ -2.24
SSSCA1O60232 PRR13P7-201ENST00000605538 430 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms