Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL139413.1-201ENST00000421309 217 ntBASIC3.45□□□□□ -1.86
LDB2O43679 OR2AS1P-201ENST00000427827 319 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB2O43679 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB2O43679 NEK4P1-201ENST00000433383 879 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AL606489.2-201ENST00000433886 234 ntBASIC3.45□□□□□ -1.86
LDB2O43679 RPS20P5-201ENST00000434808 360 ntBASIC3.45□□□□□ -1.86
LDB2O43679 RPL21P23-201ENST00000446654 460 ntBASIC3.45□□□□□ -1.86
LDB2O43679 PRDX3P3-201ENST00000447765 522 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB2O43679 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB2O43679 RPS15AP36-201ENST00000492022 382 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AC078918.1-201ENST00000498515 228 ntBASIC3.45□□□□□ -1.86
LDB2O43679 HSPD1P15-201ENST00000505573 1122 ntBASIC3.45□□□□□ -1.86
LDB2O43679 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDB2O43679 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB2O43679 AC100870.1-201ENST00000522035 505 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.45□□□□□ -1.86
LDB2O43679 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB2O43679 MIR4293-201ENST00000584305 78 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AC010928.3-201ENST00000587712 541 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB2O43679 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.45□□□□□ -1.86
LDB2O43679 AL034351.1-201ENST00000605288 668 ntBASIC3.45□□□□□ -1.86
LDB2O43679 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
LDB2O43679 AL020991.1-201ENST00000612314 373 ntBASIC3.45□□□□□ -1.86
LDB2O43679 TUG1_2.1-201ENST00000614234 87 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AC093908.1-201ENST00000623125 8092 ntBASIC3.45□□□□□ -1.86
LDB2O43679 AC243312.2-201ENST00000623340 601 ntBASIC3.45□□□□□ -1.86
LDB2O43679 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.45□□□□□ -1.86
LDB2O43679 AL356274.2-201ENST00000624379 3752 ntBASIC3.45□□□□□ -1.86
LDB2O43679 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LDB2O43679 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB2O43679 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LDB2O43679 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB2O43679 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB2O43679 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LDB2O43679 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB2O43679 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
LDB2O43679 GABPAP-201ENST00000419271 1356 ntBASIC3.44□□□□□ -1.86
LDB2O43679 SNORA31-201ENST00000362607 130 ntBASIC3.44□□□□□ -1.86
LDB2O43679 RNA5SP189-201ENST00000364920 115 ntBASIC3.44□□□□□ -1.86
LDB2O43679 RNU5E-4P-201ENST00000364931 120 ntBASIC3.44□□□□□ -1.86
LDB2O43679 Y_RNA.367-201ENST00000365544 101 ntBASIC3.44□□□□□ -1.86
LDB2O43679 Y_RNA.381-201ENST00000365666 102 ntBASIC3.44□□□□□ -1.86
LDB2O43679 RNU6-606P-201ENST00000384721 111 ntBASIC3.44□□□□□ -1.86
LDB2O43679 MIR183-201ENST00000384958 110 ntBASIC3.44□□□□□ -1.86
LDB2O43679 MIR34B-201ENST00000385076 84 ntBASIC3.44□□□□□ -1.86
LDB2O43679 RNU6-1158P-201ENST00000391167 107 ntBASIC3.44□□□□□ -1.86
LDB2O43679 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB2O43679 AL136372.1-201ENST00000403060 228 ntBASIC3.44□□□□□ -1.86
LDB2O43679 SSXP9-201ENST00000417503 292 ntBASIC3.44□□□□□ -1.86
LDB2O43679 BX842559.1-201ENST00000419615 532 ntBASIC3.44□□□□□ -1.86
LDB2O43679 SNRPEP10-201ENST00000420249 274 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AC244098.2-201ENST00000422068 99 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB2O43679 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB2O43679 SEPT14P3-201ENST00000439401 183 ntBASIC3.44□□□□□ -1.86
LDB2O43679 BNIP3P2-201ENST00000441221 577 ntBASIC3.44□□□□□ -1.86
LDB2O43679 CALM1P1-201ENST00000442082 433 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AL732372.2-207ENST00000445840 183 ntBASIC3.44□□□□□ -1.86
LDB2O43679 DDX3P2-201ENST00000446138 111 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AL162389.1-201ENST00000449233 177 ntBASIC3.44□□□□□ -1.86
LDB2O43679 SEPT14P2-201ENST00000453405 183 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB2O43679 RNU6-261P-201ENST00000459506 102 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AC025518.1-201ENST00000479856 347 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AC021205.2-201ENST00000480069 347 ntBASIC3.44□□□□□ -1.86
LDB2O43679 RPS29P25-201ENST00000481709 171 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB2O43679 SEPT14P4-201ENST00000513445 186 ntBASIC3.44□□□□□ -1.86
LDB2O43679 SNORD27.1-201ENST00000516319 72 ntBASIC3.44□□□□□ -1.86
LDB2O43679 SNORA40.12-201ENST00000516329 111 ntBASIC3.44□□□□□ -1.86
LDB2O43679 RNU6-358P-201ENST00000516564 75 ntBASIC3.44□□□□□ -1.86
LDB2O43679 NRON-201ENST00000517270 370 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB2O43679 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.44□□□□□ -1.86
LDB2O43679 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.44□□□□□ -1.86
LDB2O43679 FO082796.1-201ENST00000523795 183 ntBASIC3.44□□□□□ -1.86
LDB2O43679 FAM60DP-201ENST00000524174 632 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.44□□□□□ -1.86
LDB2O43679 AL121579.1-201ENST00000555129 305 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AC034105.3-201ENST00000565294 442 ntBASIC3.44□□□□□ -1.86
LDB2O43679 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
LDB2O43679 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.44□□□□□ -1.86
LDB2O43679 NRBF2P5-201ENST00000603087 788 ntBASIC3.44□□□□□ -1.86
LDB2O43679 XIAPP1-201ENST00000603162 600 ntBASIC3.44□□□□□ -1.86
LDB2O43679 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.44□□□□□ -1.86
LDB2O43679 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB2O43679 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
LDB2O43679 AL157700.1-201ENST00000561973 1432 ntBASIC3.44□□□□□ -1.86
LDB2O43679 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB2O43679 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
LDB2O43679 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB2O43679 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
LDB2O43679 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.43□□□□□ -1.86
LDB2O43679 CKAP2P1-201ENST00000555477 2049 ntBASIC3.43□□□□□ -1.86
LDB2O43679 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LDB2O43679 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
LDB2O43679 RNU4-35P-201ENST00000362588 141 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms